UBERON:0005162
From FANTOM5_SSTAR
| Name: | multi cell component structure | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "A structure consisting of multiple cell components but which is not itself a cell and does not have (complete) cells as a part." [CARO:0001000] | |
| Xrefs: |
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| Synonyms: | "multi-cell-component structure" EXACT [CARO:0001000] | |
| Comments: | AO notes: we go with the FMA classification rather than the CARO one. FMA def: "Anatomical cluster which has as direct parts cell parts from two or more cells." | |
| Subset: | upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000477(anatomical cluster) |
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Children
| is a: | UBERON:0000122 (neuron projection bundle),UBERON:0011215 (central nervous system cell part cluster) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10277-104E7 (optic nerve, donor1)
- 10280-104F1
- 10305-104H8
- 10308-104I2
- 10333-105B9
- 10336-105C3
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Mouse (Mus musculus)
- 10042-101F6 (corpus callosum, adult, pool1)
- 10277-104E7 (optic nerve, donor1)
- 10280-104F1
- 10305-104H8
- 10308-104I2
- 10333-105B9
- 10336-105C3
- 11959-126C6 (Neurons - spiral ganglion, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005162 (multi cell component structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
