UBERON:0005281
From FANTOM5_SSTAR
Name: | ventricular system of central nervous system | |
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Namespace: | FANTOM | |
Definition: | "a set of structures containing cerebrospinal fluid in the brain. It is continuous with the central canal of the spinal cord." [Wikipedia:Ventricular_system] | |
Xrefs: |
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Synonyms: |
"ventricular system" EXACT [ZFA:0001261] "ventricular system of neuraxis" EXACT [FMA:242675] | |
Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000467(anatomical system),UBERON:0004121(ectoderm-derived structure) |
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part_of: | UBERON:0001017(central nervous system) |
Children
part of: | UBERON:0005282 (ventricular system of brain),UBERON:0013150 (future brain vesicle) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11492-119E7 (Fibroblast - Choroid Plexus, donor1)
- 11572-120E6 (Fibroblast - Choroid Plexus, donor2)
- 11653-122E6 (Fibroblast - Choroid Plexus, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005281 (ventricular system of central nervous system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data