UBERON:0005396
From FANTOM5_SSTAR
Name: | carotid artery segment | |
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Namespace: | FANTOM | |
Definition: | "One of: the common carotid artery, or its branches, the external and internal carotid arteries." [https://sourceforge.net/tracker/?func | |
Xrefs: |
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Synonyms: |
"carotid artery" EXACT [MA:0001925] "subdivision of common carotid artery" EXACT [FMA:70504] | |
Comments: | Editor/usage notes: This is a generic grouping class that is the superclass of the trunks/branches of the common carotid artery. Note that AOs vary widely in how they divide up and generalize arteries | |
Subset: |
grouping_class vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004573(systemic artery) |
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Children
part of: | CL:0002596 (smooth muscle cell of the carotid artery) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
- 11362-117I3 (Smooth Muscle Cells - Carotid, donor2)
- 11434-118H3 (Smooth Muscle Cells - Carotid, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005396 (carotid artery segment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.