UBERON:0005424
From FANTOM5_SSTAR
| Name: | presumptive retinal pigmented epithelium | |
|---|---|---|
| Definition: | "Portion of tissue that is the outer layer of the optic cup and will become the retinal pigmented epithelium." [ZFIN:curator] | |
| Xrefs: |
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| Synonyms: |
"optic cup outer layer" EXACT [EHDAA2:0001306] "outer layer optic cup" EXACT [ZFA:0000064] "presumptive pigmented epithelia" EXACT PLURAL [ZFA:0000064] | |
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure),UBERON:0010312(immature eye) |
|---|---|
| part_of: | UBERON:0003072(optic cup) |
Children
| develops from: | UBERON:0001782 (pigmented layer of retina) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005424 (presumptive retinal pigmented epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
