UBERON:0005620
From FANTOM5_SSTAR
| Name: | primary palate | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Roof of the buccal cavity, formed from the fusion of vomer, pterygoid, parasphenoid, palatine, ectopterygoid." [ISBN10:0073040584, Wikipedia:Primitive_palate] | ||
| Xrefs: |
| ||
| Synonyms: |
"primary palate" RELATED [Wikipedia:Primitive_palate] "primary palate process" EXACT [EHDAA2:0001499] | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000078(mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0007375(roof of mouth),UBERON:0010313(neural crest-derived structure) |
|---|---|
| develops_from: | UBERON:0007238(1st arch maxillary component),UBERON:0009714(intermaxillary process) |
| part_of: | UBERON:0002244(premaxilla) |
Children
| part of: | UBERON:0005705 (primary palate mesenchyme) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005620 (primary palate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_75811648e46e21223dc561181ad0ab99 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_75811648e46e21223dc561181ad0ab99 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_1499ac71a12b8b15c6d878b1381ffd4e | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_1499ac71a12b8b15c6d878b1381ffd4e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_1499ac71a12b8b15c6d878b1381ffd4e | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_1499ac71a12b8b15c6d878b1381ffd4e | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_1499ac71a12b8b15c6d878b1381ffd4e | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_1499ac71a12b8b15c6d878b1381ffd4e | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_1499ac71a12b8b15c6d878b1381ffd4e | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_1499ac71a12b8b15c6d878b1381ffd4e | p11@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_b13453fa554025b3ab51f83be951012b | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_b13453fa554025b3ab51f83be951012b | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_b13453fa554025b3ab51f83be951012b | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_b13453fa554025b3ab51f83be951012b | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_14352c89821a5976c165f3ba2f5fa84c | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_14352c89821a5976c165f3ba2f5fa84c | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_63d984a27833102e8e197a55a43268a5 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_63d984a27833102e8e197a55a43268a5 | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_63d984a27833102e8e197a55a43268a5 | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_63d984a27833102e8e197a55a43268a5 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_63d984a27833102e8e197a55a43268a5 | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_63d984a27833102e8e197a55a43268a5 | p@chr8:57354278..57354286, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_0e8db9e04f5fc28990293e6086a58680 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_0e8db9e04f5fc28990293e6086a58680 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_ed3d8f3381d32b034ee08625e316ad44 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_ed3d8f3381d32b034ee08625e316ad44 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_ed3d8f3381d32b034ee08625e316ad44 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_ed3d8f3381d32b034ee08625e316ad44 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_ed3d8f3381d32b034ee08625e316ad44 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_ed3d8f3381d32b034ee08625e316ad44 | p7@ALX1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_9a5e6ec065a304eb7505925e7641ca02 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_9a5e6ec065a304eb7505925e7641ca02 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_9a5e6ec065a304eb7505925e7641ca02 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_9a5e6ec065a304eb7505925e7641ca02 | p23@FLT1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_0c9ff224402d65476864ed79c72a3959 | p@chr8:57353666..57353675, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_19ff9a232e390b384122b89a31a01a59 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_19ff9a232e390b384122b89a31a01a59 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_19ff9a232e390b384122b89a31a01a59 | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_19ff9a232e390b384122b89a31a01a59 | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_19ff9a232e390b384122b89a31a01a59 | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_19ff9a232e390b384122b89a31a01a59 | p8@LHX8 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_d96d6b7dbff53e780a3acb32e0d32b37 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_d96d6b7dbff53e780a3acb32e0d32b37 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_d96d6b7dbff53e780a3acb32e0d32b37 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_d96d6b7dbff53e780a3acb32e0d32b37 | p@chr5:75912831..75912842, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_fd4f547679801ab792d366fa8056daae | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_fd4f547679801ab792d366fa8056daae | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_fd4f547679801ab792d366fa8056daae | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_fd4f547679801ab792d366fa8056daae | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_343b8485e22ca46d160140020a7d4df9 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_343b8485e22ca46d160140020a7d4df9 | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_343b8485e22ca46d160140020a7d4df9 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_343b8485e22ca46d160140020a7d4df9 | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_343b8485e22ca46d160140020a7d4df9 | p4@CPZ |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_343b8485e22ca46d160140020a7d4df9 | p5@PENK |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_3a5b9e188e5bdab5fcfbaf20bba21d51 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_3a5b9e188e5bdab5fcfbaf20bba21d51 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_ee811dd6bdb0919de7b48168cf2ce2f4 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_ee811dd6bdb0919de7b48168cf2ce2f4 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_e628a92577b7a9805d750ead0115b024 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_e628a92577b7a9805d750ead0115b024 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_e628a92577b7a9805d750ead0115b024 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_e628a92577b7a9805d750ead0115b024 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p12@FBN2 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_fcb2e9953c957bfcb1fbfde095ff9d15 | p@chr5:19721484..19721507, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_dcc267db1d6709c7d96f8775ed41fd9f | p@chr8:57354360..57354367, + |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_956986b26209a2ad8c61a97071caf18c | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_956986b26209a2ad8c61a97071caf18c | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_956986b26209a2ad8c61a97071caf18c | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_956986b26209a2ad8c61a97071caf18c | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_b25d1878dbde1759a773dea883f51371 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_b25d1878dbde1759a773dea883f51371 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_b25d1878dbde1759a773dea883f51371 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_b25d1878dbde1759a773dea883f51371 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_b25d1878dbde1759a773dea883f51371 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_b25d1878dbde1759a773dea883f51371 | p@chr17:79071218..79071221, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_b76296b700a24999d23178cb8609da04 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_b76296b700a24999d23178cb8609da04 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_9324640223514a8d21f1dbe23e3ab008 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_9324640223514a8d21f1dbe23e3ab008 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_9324640223514a8d21f1dbe23e3ab008 | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_9324640223514a8d21f1dbe23e3ab008 | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_9324640223514a8d21f1dbe23e3ab008 | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_9324640223514a8d21f1dbe23e3ab008 | p@chr14:89044406..89044416, + |
| 4.2e-29 | FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_aec83d49f41789088b587492eeb7adaa | p11@MAB21L2 |
| 4.2e-29 | FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_aec83d49f41789088b587492eeb7adaa | p@chr13:36046127..36046134, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is the upper roof of the mouth that is underlain by bones such as the parasphenoid, vomer, metapterygoid, orbitosphenoid.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
