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UBERON:0007196

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Name:tracheobronchial tree
Namespace:FANTOM
Definition:"the structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells." [Wikipedia:Tracheobronchial_tree]
Xrefs:
links:

FMA:7393

SCTID:361384001
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000062(organ),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001558(lower respiratory tract)



Children

part of:UBERON:0002185 (bronchus),UBERON:0002186 (bronchiole),CL:0002202 (epithelial cell of tracheobronchial tree),UBERON:0003126 (trachea)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007196 (tracheobronchial tree), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr4:88563185..88563192,-#_2ffbc88e47a08d0f02469b52883ae548p@chr4:88563185..88563192, -
1.58e-86FFCP PHASE1:Mm9::chr6:147205677..147205683,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205677..147205683, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941246..110941254,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941246..110941254, +
1.58e-86FFCP PHASE1:Mm9::chr2:164389604..164389615,+#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164389604..164389615, +
1.58e-86FFCP PHASE1:Mm9::chr6:147338308..147338339,-#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147338308..147338339, -
1.58e-86FFCP PHASE1:Mm9::chr13:115644652..115644657,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115644652..115644657, -
1.58e-86FFCP PHASE2:Mm9::chr5:91199084..91199088,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91199084..91199088, -
1.58e-86FFCP PHASE1:Mm9::chr4:88696144..88696152,+#_2ffbc88e47a08d0f02469b52883ae548p3@Gm12603
1.58e-86FFCP PHASE2:Mm9::chr11:4165247..4165267,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr9:110941233..110941240,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr11:86461733..86461747,-#_2ffbc88e47a08d0f02469b52883ae548p@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr15:101258041..101258052,+#_2ffbc88e47a08d0f02469b52883ae548p@chr15:101258041..101258052, +
1.58e-86FFCP PHASE1:Mm9::chr3:89487103..89487111,-#_2ffbc88e47a08d0f02469b52883ae548p@chr3:89487103..89487111, -
1.58e-86FFCP PHASE1:Mm9::chr5:91198876..91198885,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91198876..91198885, +
1.58e-86FFCP PHASE2:Mm9::chr5:135420996..135421000,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr1:151954385..151954387,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:151954385..151954387, +
1.58e-86FFCP PHASE2:Mm9::chr13:72401408..72401416,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:72401408..72401416, -
1.58e-86FFCP PHASE1:Mm9::chr2:60538178..60538182,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr2:164393992..164394012,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr5:135422125..135422141,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135422125..135422141, -
1.58e-86FFCP PHASE2:Mm9::chr11:100006864..100006873,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:100006864..100006873, +
1.58e-86FFCP PHASE2:Mm9::chr6:147205603..147205610,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr13:115644652..115644657,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115644652..115644657, -
1.58e-86FFCP PHASE1:Mm9::chr4:88696177..88696184,+#_2ffbc88e47a08d0f02469b52883ae548p2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr11:4165247..4165267,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:4165247..4165267, +
1.58e-86FFCP PHASE2:Mm9::chr9:110941246..110941254,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941246..110941254, +
1.58e-86FFCP PHASE1:Mm9::chr17:25885558..25885567,+#_2ffbc88e47a08d0f02469b52883ae548p@chr17:25885558..25885567, +
1.58e-86FFCP PHASE1:Mm9::chr11:86461733..86461747,-#_2ffbc88e47a08d0f02469b52883ae548p@chr11:86461733..86461747, -
1.58e-86FFCP PHASE1:Mm9::chr5:91199084..91199088,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91199084..91199088, -
1.58e-86FFCP PHASE1:Mm9::chr1:108303887..108303893,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr13:115722413..115722430,+#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115722413..115722430, +
1.58e-86FFCP PHASE1:Mm9::chr4:88563185..88563192,-#_2ffbc88e47a08d0f02469b52883ae548p@chr4:88563185..88563192, -
1.58e-86FFCP PHASE2:Mm9::chr6:147205677..147205683,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205677..147205683, +
1.58e-86FFCP PHASE2:Mm9::chr2:164389604..164389615,+#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164389604..164389615, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696144..88696152,+#_2ffbc88e47a08d0f02469b52883ae548p3@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr5:135422125..135422141,-#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135422125..135422141, -
1.58e-86FFCP PHASE1:Mm9::chr13:72401408..72401416,-#_2ffbc88e47a08d0f02469b52883ae548p@chr13:72401408..72401416, -
1.58e-86FFCP PHASE2:Mm9::chr15:101258041..101258052,+#_2ffbc88e47a08d0f02469b52883ae548p@chr15:101258041..101258052, +
1.58e-86FFCP PHASE2:Mm9::chr1:108303887..108303893,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:108303887..108303893, +
1.58e-86FFCP PHASE1:Mm9::chr1:151954385..151954387,+#_2ffbc88e47a08d0f02469b52883ae548p@chr1:151954385..151954387, +
1.58e-86FFCP PHASE1:Mm9::chr11:100006864..100006873,+#_2ffbc88e47a08d0f02469b52883ae548p@chr11:100006864..100006873, +
1.58e-86FFCP PHASE1:Mm9::chr11:96608719..96608730,-#_2ffbc88e47a08d0f02469b52883ae548p1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE1:Mm9::chr5:135420996..135421000,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:135420996..135421000, +
1.58e-86FFCP PHASE2:Mm9::chr2:60538178..60538182,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:60538178..60538182, -
1.58e-86FFCP PHASE1:Mm9::chr12:17549752..17549763,+#_2ffbc88e47a08d0f02469b52883ae548p@chr12:17549752..17549763, +
1.58e-86FFCP PHASE2:Mm9::chr17:25885558..25885567,+#_2ffbc88e47a08d0f02469b52883ae548p@chr17:25885558..25885567, +
1.58e-86FFCP PHASE1:Mm9::chr6:147205603..147205610,+#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147205603..147205610, +
1.58e-86FFCP PHASE2:Mm9::chr13:115722413..115722430,+#_2ffbc88e47a08d0f02469b52883ae548p@chr13:115722413..115722430, +
1.58e-86FFCP PHASE2:Mm9::chr2:164393992..164394012,-#_2ffbc88e47a08d0f02469b52883ae548p@chr2:164393992..164394012, -
1.58e-86FFCP PHASE2:Mm9::chr16:32641594..32641601,+#_2ffbc88e47a08d0f02469b52883ae548p@chr16:32641594..32641601, +
1.58e-86FFCP PHASE2:Mm9::chr4:88696177..88696184,+#_2ffbc88e47a08d0f02469b52883ae548p2@Gm12603
1.58e-86FFCP PHASE1:Mm9::chr16:32641594..32641601,+#_2ffbc88e47a08d0f02469b52883ae548p@chr16:32641594..32641601, +
1.58e-86FFCP PHASE1:Mm9::chr9:110941233..110941240,+#_2ffbc88e47a08d0f02469b52883ae548p@chr9:110941233..110941240, +
1.58e-86FFCP PHASE2:Mm9::chr6:147338308..147338339,-#_2ffbc88e47a08d0f02469b52883ae548p@chr6:147338308..147338339, -
1.58e-86FFCP PHASE2:Mm9::chr5:91198876..91198885,+#_2ffbc88e47a08d0f02469b52883ae548p@chr5:91198876..91198885, +
1.58e-86FFCP PHASE2:Mm9::chr11:96608719..96608730,-#_2ffbc88e47a08d0f02469b52883ae548p1@ENSMUST00000170876, p1@uc011ydj.1
1.58e-86FFCP PHASE2:Mm9::chr12:17549752..17549763,+#_2ffbc88e47a08d0f02469b52883ae548p@chr12:17549752..17549763, +
1.58e-86FFCP PHASE2:Mm9::chr3:89487103..89487111,-#_2ffbc88e47a08d0f02469b52883ae548p@chr3:89487103..89487111, -
1.33e-65FFCP PHASE1:Mm9::chr11:4164303..4164316,+#_0f50f82e1aa339921e9a97292328a978p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE1:Mm9::chr11:100002128..100002131,+#_0f50f82e1aa339921e9a97292328a978p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE1:Mm9::chr14:34905716..34905718,+#_0f50f82e1aa339921e9a97292328a978p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr2:144564146..144564166,+#_0f50f82e1aa339921e9a97292328a978p3@Dtd1
1.33e-65FFCP PHASE1:Mm9::chr3:90392458..90392472,+#_0f50f82e1aa339921e9a97292328a978p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE2:Mm9::chr2:144564146..144564166,+#_0f50f82e1aa339921e9a97292328a978p3@Dtd1
1.33e-65FFCP PHASE2:Mm9::chr6:147212620..147212625,+#_0f50f82e1aa339921e9a97292328a978p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE2:Mm9::chr3:90392458..90392472,+#_0f50f82e1aa339921e9a97292328a978p@chr3:90392458..90392472, +
1.33e-65FFCP PHASE1:Mm9::chr19:47939269..47939279,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE2:Mm9::chr3:121437538..121437546,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE2:Mm9::chr19:47932377..47932386,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE1:Mm9::chr6:147212620..147212625,+#_0f50f82e1aa339921e9a97292328a978p@chr6:147212620..147212625, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437538..121437546,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437538..121437546, +
1.33e-65FFCP PHASE1:Mm9::chr14:31386795..31386797,-#_0f50f82e1aa339921e9a97292328a978p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE2:Mm9::chr11:100002128..100002131,+#_0f50f82e1aa339921e9a97292328a978p@chr11:100002128..100002131, +
1.33e-65FFCP PHASE1:Mm9::chrX:20383628..20383635,+#_0f50f82e1aa339921e9a97292328a978p@chrX:20383628..20383635, +
1.33e-65FFCP PHASE2:Mm9::chr11:29642912..29642916,-#_0f50f82e1aa339921e9a97292328a978p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE1:Mm9::chr19:47932377..47932386,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47932377..47932386, -
1.33e-65FFCP PHASE2:Mm9::chr14:31386795..31386797,-#_0f50f82e1aa339921e9a97292328a978p@chr14:31386795..31386797, -
1.33e-65FFCP PHASE1:Mm9::chr11:29642912..29642916,-#_0f50f82e1aa339921e9a97292328a978p@chr11:29642912..29642916, -
1.33e-65FFCP PHASE2:Mm9::chr19:47939269..47939279,-#_0f50f82e1aa339921e9a97292328a978p@chr19:47939269..47939279, -
1.33e-65FFCP PHASE2:Mm9::chr3:121437587..121437593,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr14:34905716..34905718,+#_0f50f82e1aa339921e9a97292328a978p@chr14:34905716..34905718, +
1.33e-65FFCP PHASE1:Mm9::chr3:121437587..121437593,+#_0f50f82e1aa339921e9a97292328a978p@chr3:121437587..121437593, +
1.33e-65FFCP PHASE2:Mm9::chr11:4164303..4164316,+#_0f50f82e1aa339921e9a97292328a978p@chr11:4164303..4164316, +
1.33e-65FFCP PHASE2:Mm9::chrX:20383628..20383635,+#_0f50f82e1aa339921e9a97292328a978p@chrX:20383628..20383635, +
6.04e-65FFCP PHASE2:Mm9::chr15:38385124..38385138,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr15:38385124..38385138, +
6.04e-65FFCP PHASE2:Mm9::chr19:47928736..47928764,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr17:25888467..25888513,-#_d7fe8415242d053b7fe7be021c7ec8fbp@chr17:25888467..25888513, -
6.04e-65FFCP PHASE1:Mm9::chr15:38385124..38385138,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr15:38385124..38385138, +
6.04e-65FFCP PHASE1:Mm9::chr19:47928736..47928764,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr19:47928736..47928764, +
6.04e-65FFCP PHASE2:Mm9::chr1:90456476..90456498,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr1:90456476..90456498, +
6.04e-65FFCP PHASE1:Mm9::chr17:25888467..25888513,-#_d7fe8415242d053b7fe7be021c7ec8fbp@chr17:25888467..25888513, -
6.04e-65FFCP PHASE1:Mm9::chr1:90456476..90456498,+#_d7fe8415242d053b7fe7be021c7ec8fbp@chr1:90456476..90456498, +
4.9e-53FFCP PHASE1:Mm9::chr17:71105425..71105430,+#_4ac77f64f8e4c2a62220e624519daee6p@chr17:71105425..71105430, +
4.9e-53FFCP PHASE1:Mm9::chrX:163645025..163645028,+#_4ac77f64f8e4c2a62220e624519daee6p@chrX:163645025..163645028, +
4.9e-53FFCP PHASE1:Mm9::chr11:96608968..96608974,-#_4ac77f64f8e4c2a62220e624519daee6p2@ENSMUST00000166907
4.9e-53FFCP PHASE1:Mm9::chr6:147212455..147212462,-#_4ac77f64f8e4c2a62220e624519daee6p6@Pthlh
4.9e-53FFCP PHASE1:Mm9::chr5:103804464..103804467,+#_4ac77f64f8e4c2a62220e624519daee6p@chr5:103804464..103804467, +
4.9e-53FFCP PHASE1:Mm9::chr5:92644371..92644380,-#_4ac77f64f8e4c2a62220e624519daee6p1@U90926
4.9e-53FFCP PHASE2:Mm9::chr12:8799233..8799252,+#_4ac77f64f8e4c2a62220e624519daee6p@chr12:8799233..8799252, +
4.9e-53FFCP PHASE1:Mm9::chr1:152012112..152012121,-#_4ac77f64f8e4c2a62220e624519daee6p6@ENSMUST00000163840

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