UBERON:0007806
From FANTOM5_SSTAR
| Name: | connecting stalk | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord." [Medical_Dictionary:http://medical-dictionary.thefreedictionary.com/] | ||
| Xrefs: |
| ||
| Comments: | todo - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| develops_from: | UBERON:0005728(extraembryonic mesoderm) |
Children
| develops from: | UBERON:0002331 (umbilical cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007806 (connecting stalk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.79e-79 | FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
| 2.16e-63 | FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
| 2.16e-63 | FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:53511711..53511720,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:53511711..53511720, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76017386..76017395,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76017386..76017395, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:135705366..135705371,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135705366..135705371, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18179708..18179733,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18179708..18179733, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:11264766..11264775,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:11264766..11264775, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:49488905..49488920,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488905..49488920, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74995216..74995247,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995216..74995247, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:129054695..129054717,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:129054695..129054717, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:228216535..228216554,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p14@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:138023078..138023089,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023078..138023089, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chrX:109653507..109653518,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chrX:109653507..109653518, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:195306434..195306439,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p10@APOD |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:228216642..228216661,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr20:38442102..38442111,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:38442102..38442111, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chrX:10129292..10129306,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chrX:10129292..10129306, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:150322254..150322291,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:150322254..150322291, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167957459..167957470,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167957459..167957470, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:43934923..43934932,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:43934923..43934932, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr5:77713534..77713543,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:77713534..77713543, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:94933452..94933457,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:94933452..94933457, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:135486487..135486491,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:135486487..135486491, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr5:146717844..146717861,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:146717844..146717861, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:74682916..74682923,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:74682916..74682923, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:15651894..15651904,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p4@NBAS |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:167944606..167944610,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167944606..167944610, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:148284480..148284484,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148284480..148284484, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr14:76957782..76957792,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957782..76957792, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167791926..167791930,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167791926..167791930, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:59970765..59970787,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:59970765..59970787, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr11:128154946..128154955,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr11:128154946..128154955, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:106397597..106397610,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106397597..106397610, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:31150998..31151005,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:31150998..31151005, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:153038353..153038371,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:153038353..153038371, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:148278743..148278751,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148278743..148278751, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr14:76957782..76957792,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957782..76957792, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:2930946..2930963,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:2930946..2930963, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:234765062..234765067,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p6@LINC00184 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:135738522..135738525,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135738522..135738525, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:53510877..53510886,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p2@uc002qao.2 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr13:102271725..102271736,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr13:102271725..102271736, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:75001932..75001956,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:75001932..75001956, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18178842..18178867,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18178842..18178867, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:3149800..3149805,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:3149800..3149805, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74995205..74995211,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995205..74995211, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr20:38442120..38442126,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:38442120..38442126, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:87324164..87324175,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:87324164..87324175, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr5:28145264..28145272,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:28145264..28145272, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:169775687..169775690,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:169775687..169775690, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:45063061..45063082,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:45063061..45063082, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:138023154..138023161,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023154..138023161, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr5:162742836..162742845,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:162742836..162742845, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:111331533..111331540,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:111331533..111331540, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:77198556..77198565,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:77198556..77198565, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:157301317..157301362,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:157301317..157301362, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:182684840..182684848,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:182684840..182684848, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:10983266..10983276,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:10983266..10983276, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:120921395..120921406,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:120921395..120921406, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr6:491208..491217,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:491208..491217, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr22:20105576..20105585,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@RANBP1 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr4:85688154..85688161,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:85688154..85688161, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr10:31996512..31996530,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p5@ENST00000433770 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:137816618..137816627,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:137816618..137816627, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:106363986..106363994,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106363986..106363994, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:484679..484683,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:484679..484683, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:15633244..15633249,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:15633244..15633249, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr10:120924761..120924770,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p10@SFXN4 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr6:87324188..87324195,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:87324188..87324195, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:45926316..45926329,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:45926316..45926329, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:142250880..142250889,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p4@AF430683, p4@AF430684, p4@AF430685 |
| 1.1e-59 | FFCP PHASE2:Hg19::chr4:167938808..167938815,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167938808..167938815, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:228216535..228216554,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p14@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:212870782..212870788,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:212870782..212870788, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr22:37484406..37484413,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr22:37484406..37484413, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:65209811..65209818,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:65209811..65209818, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:148293218..148293252,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148293218..148293252, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr1:177159780..177159790,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:177159780..177159790, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr3:119279086..119279095,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:119279086..119279095, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr7:135735084..135735112,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135735084..135735112, + |
| 1.1e-59 | FFCP PHASE2:Hg19::chr21:18180126..18180130,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18180126..18180130, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:45954667..45954675,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p42@IGFBP3 |
| 1.1e-59 | FFCP PHASE1:Hg19::chr12:129054695..129054717,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:129054695..129054717, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr9:74997054..74997058,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74997054..74997058, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:106363901..106363915,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106363901..106363915, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr19:53511749..53511757,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:53511749..53511757, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr7:135705379..135705388,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135705379..135705388, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr21:18179795..18179798,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18179795..18179798, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr19:49488921..49488932,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488921..49488932, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr13:101999642..101999655,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr13:101999642..101999655, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr9:74995293..74995311,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995293..74995311, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr12:130530117..130530125,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:130530117..130530125, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr8:56618992..56618998,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:56618992..56618998, + |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:228216568..228216578,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p15@MFF |
| 1.1e-59 | FFCP PHASE2:Hg19::chr3:111319059..111319101,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:111319059..111319101, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr1:207617923..207617929,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:207617923..207617929, - |
