UBERON:0008886
From FANTOM5_SSTAR
Name: | pulmonary vascular system | |
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Namespace: | FANTOM | |
Definition: | "Subdivision of cardiovascular system which has as its parts the pulmonary arterial and venous tree organs." [FMA:45621, Wikipedia:Pulmonary_circulation] | |
Xrefs: |
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Synonyms: | "pulmonary circulatory system" EXACT [FMA:45621] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0007798(vascular system) |
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part_of: | UBERON:0004535(cardiovascular system) |
Children
part of: | UBERON:0002012 (pulmonary artery) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
- 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
- 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
- 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008886 (pulmonary vascular system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data