UBERON:0008895
From FANTOM5_SSTAR
Name: | splanchnocranium | |
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Definition: | "Subdivision of endoskeleton derived from pharyngeal arches" [ISBN10:0073040584, UBERON:cjm, Wikipedia:Facial_skeleton] | |
Xrefs: |
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Synonyms: |
"branchial arch skeleton" RELATED [] "gill arch skeleton" RELATED [] "pharyngeal arch" RELATED INCONSISTENT [VSAO:0000149] "pharyngeal arch skeleton" RELATED [ZFA:0001216] "pharyngeal skeleton" RELATED [ZFA:0001216] "visceral skeleton" RELATED [] "viscerocranium" EXACT INCONSISTENT [VHOG:0000315, Wikipedia:Viscerocranium, ZFA:0001216] | |
Comments: | AO notes: VSAO labels this term 'pharyngeal arch' (2012-06-01) - however, it clearly means pharyngeal arch skeleton. Editor/AO notes: many sources define this as the part of the endoskeletal that is from pharyngeal arches - this would make it part-disjoint from dermatocranium. However, there are many bones in AOs that have part-paths to both (e.g. |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0011159(primary subdivision of cranial skeletal system) |
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develops_from: | UBERON:0002539(pharyngeal arch) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11929-125I3 (Mallassez-derived cells, donor2)
- 11930-125I4 (Mallassez-derived cells, donor3)
- 12142-128E9 (Mallassez-derived cells, donor1 (MZH3))
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008895 (splanchnocranium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium and consists of the jaws, hyoid and branchial arches.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cluster that is part of the cranium and consists of the jaws, hyoid, and branchial arches.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.