Personal tools

UBERON:0009123

From FANTOM5_SSTAR

Jump to: navigation, search

Name:otic cup
Namespace:FANTOM

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0003069(otic placode)



Children

develops from:UBERON:0003051 (ear vesicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_b1910012f17566919440def95cc5be02p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_b1910012f17566919440def95cc5be02p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_b1910012f17566919440def95cc5be02p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_b1910012f17566919440def95cc5be02p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_b1910012f17566919440def95cc5be02p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_b1910012f17566919440def95cc5be02p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_b1910012f17566919440def95cc5be02p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_b1910012f17566919440def95cc5be02p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_b1910012f17566919440def95cc5be02p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_b1910012f17566919440def95cc5be02p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_b1910012f17566919440def95cc5be02p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_b1910012f17566919440def95cc5be02p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_b1910012f17566919440def95cc5be02p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_b1910012f17566919440def95cc5be02p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_b1910012f17566919440def95cc5be02p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_b1910012f17566919440def95cc5be02p2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_b1910012f17566919440def95cc5be02p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_b1910012f17566919440def95cc5be02p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_b1910012f17566919440def95cc5be02p11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_b1910012f17566919440def95cc5be02p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_b1910012f17566919440def95cc5be02p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_b1910012f17566919440def95cc5be02p2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_b1910012f17566919440def95cc5be02p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_b1910012f17566919440def95cc5be02p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_b1910012f17566919440def95cc5be02p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_b1910012f17566919440def95cc5be02p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_b1910012f17566919440def95cc5be02p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_b1910012f17566919440def95cc5be02p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_b1910012f17566919440def95cc5be02p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_b1910012f17566919440def95cc5be02p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_b1910012f17566919440def95cc5be02p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_b1910012f17566919440def95cc5be02p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_b1910012f17566919440def95cc5be02p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_b1910012f17566919440def95cc5be02p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_b1910012f17566919440def95cc5be02p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_b1910012f17566919440def95cc5be02p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_b1910012f17566919440def95cc5be02p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_b1910012f17566919440def95cc5be02p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_b1910012f17566919440def95cc5be02p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_b1910012f17566919440def95cc5be02p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_b1910012f17566919440def95cc5be02p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_b1910012f17566919440def95cc5be02p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_b1910012f17566919440def95cc5be02p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_b1910012f17566919440def95cc5be02p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_b1910012f17566919440def95cc5be02p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_b1910012f17566919440def95cc5be02p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_b1910012f17566919440def95cc5be02p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_b1910012f17566919440def95cc5be02p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_b1910012f17566919440def95cc5be02p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_b1910012f17566919440def95cc5be02p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_b1910012f17566919440def95cc5be02p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_b1910012f17566919440def95cc5be02p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_b1910012f17566919440def95cc5be02p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_b1910012f17566919440def95cc5be02p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_b1910012f17566919440def95cc5be02p4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_b1910012f17566919440def95cc5be02p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_b1910012f17566919440def95cc5be02p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_b1910012f17566919440def95cc5be02p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_b1910012f17566919440def95cc5be02p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_b1910012f17566919440def95cc5be02p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_b1910012f17566919440def95cc5be02p9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_b1910012f17566919440def95cc5be02p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_b1910012f17566919440def95cc5be02p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_b1910012f17566919440def95cc5be02p1@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_b1910012f17566919440def95cc5be02p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_b1910012f17566919440def95cc5be02p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_b1910012f17566919440def95cc5be02p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_b1910012f17566919440def95cc5be02p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_b1910012f17566919440def95cc5be02p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_b1910012f17566919440def95cc5be02p6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_b1910012f17566919440def95cc5be02p3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_b1910012f17566919440def95cc5be02p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_b1910012f17566919440def95cc5be02p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_b1910012f17566919440def95cc5be02p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_b1910012f17566919440def95cc5be02p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_b1910012f17566919440def95cc5be02p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_b1910012f17566919440def95cc5be02p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_b1910012f17566919440def95cc5be02p2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_b1910012f17566919440def95cc5be02p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_b1910012f17566919440def95cc5be02p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_b1910012f17566919440def95cc5be02p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_b1910012f17566919440def95cc5be02p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_b1910012f17566919440def95cc5be02p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_b1910012f17566919440def95cc5be02p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_b1910012f17566919440def95cc5be02p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_b1910012f17566919440def95cc5be02p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_b1910012f17566919440def95cc5be02p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_b1910012f17566919440def95cc5be02p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_b1910012f17566919440def95cc5be02p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_b1910012f17566919440def95cc5be02p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_b1910012f17566919440def95cc5be02p3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_b1910012f17566919440def95cc5be02p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_b1910012f17566919440def95cc5be02p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_b1910012f17566919440def95cc5be02p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02p@chr17:13983095..13983100, +