UBERON:0009569
From FANTOM5_SSTAR
Name: | subdivision of trunk | |
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Namespace: | FANTOM | |
Xrefs: |
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Synonyms: |
"region of trunk" EXACT [FMA:25054] "trunk subdivision" EXACT [FMA:25054] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000475(organism subdivision) |
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part_of: | UBERON:0002100(trunk) |
Children
is a: | UBERON:0000915 (thoracic segment of trunk),UBERON:0000916 (abdomen),UBERON:0001443 (chest),UBERON:0002417 (abdominal segment of trunk) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10015-101C6 (esophagus, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
... further results Mouse (Mus musculus)
- 10015-101C6 (esophagus, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009569 (subdivision of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data