UBERON:0010225

Name:	thalamic complex
Namespace:	FANTOM
Xrefs:	Expandlinks: EHDAA2:0004469 FMA:258745

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0002784(regional part of diencephalon)
part_of:	UBERON:0001894(diencephalon)

Children

part of:	UBERON:0001897 (dorsal plus ventral thalamus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10154-103A1 (thalamus, adult, donor10252)
• 10168-103B6 (thalamus - adult, donor10196)
• 10366-105F6 (thalamus, newborn, donor10223)
• 10370-105G1 (thalamus, adult, donor10258)

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010225 (thalamic complex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
4.61e-131	FFCP PHASE2:Hg19::chr2:198530770..198530773,-	p@chr2:198530770..198530773, -
4.61e-131	FFCP PHASE1:Hg19::chr2:198530770..198530773,-	p@chr2:198530770..198530773, -
1.55e-98	FFCP PHASE2:Hg19::chrX:140890284..140890288,+	p@chrX:140890284..140890288, +
1.55e-98	FFCP PHASE1:Hg19::chrX:140890284..140890288,+	p@chrX:140890284..140890288, +
1.05e-79	FFCP PHASE1:Hg19::chr9:108129231..108129235,+	p@chr9:108129231..108129235, +
1.05e-79	FFCP PHASE2:Hg19::chr9:108129231..108129235,+	p@chr9:108129231..108129235, +
1.45e-66	FFCP PHASE1:Hg19::chr10:681520..681525,-	p@chr10:681520..681525, -
1.45e-66	FFCP PHASE2:Hg19::chr10:681520..681525,-	p@chr10:681520..681525, -
5.53e-66	FFCP PHASE2:Hg19::chr2:201599836..201599844,-	p3@LOC100507140
5.53e-66	FFCP PHASE1:Hg19::chr2:201599836..201599844,-	p3@LOC100507140
1.13e-57	FFCP PHASE1:Hg19::chr17:70890496..70890500,-	p@chr17:70890496..70890500, -
1.13e-57	FFCP PHASE2:Hg19::chr17:70890496..70890500,-	p@chr17:70890496..70890500, -
1.51e-57	FFCP PHASE1:Hg19::chr17:36605118..36605121,+	p@chr17:36605118..36605121, +
1.51e-57	FFCP PHASE2:Hg19::chr17:36605118..36605121,+	p@chr17:36605118..36605121, +
4.77e-57	FFCP PHASE2:Hg19::chr6:97520453..97520454,+	p@chr6:97520453..97520454, +
4.77e-57	FFCP PHASE1:Hg19::chr6:97520453..97520454,+	p@chr6:97520453..97520454, +
6.36e-57	FFCP PHASE2:Hg19::chr3:133487652..133487656,+	p@chr3:133487652..133487656, +
6.36e-57	FFCP PHASE2:Hg19::chr21:41300975..41300984,+	p@chr21:41300975..41300984, +
6.36e-57	FFCP PHASE1:Hg19::chr3:133487652..133487656,+	p@chr3:133487652..133487656, +
6.36e-57	FFCP PHASE1:Hg19::chr21:41300975..41300984,+	p@chr21:41300975..41300984, +
8.82e-51	FFCP PHASE1:Hg19::chr1:201476057..201476070,+	p4@ENST00000454651
8.82e-51	FFCP PHASE2:Hg19::chr17:73865552..73865562,+	p@chr17:73865552..73865562, +
8.82e-51	FFCP PHASE1:Hg19::chr17:73865552..73865562,+	p@chr17:73865552..73865562, +
8.82e-51	FFCP PHASE2:Hg19::chr1:201476057..201476070,+	p4@ENST00000454651
1.88e-50	FFCP PHASE1:Hg19::chr8:23127683..23127694,+	p8@R3HCC1
1.88e-50	FFCP PHASE2:Hg19::chr6:134605007..134605011,-	p@chr6:134605007..134605011, -
1.88e-50	FFCP PHASE1:Hg19::chr6:134605007..134605011,-	p@chr6:134605007..134605011, -
1.88e-50	FFCP PHASE2:Hg19::chr8:23127683..23127694,+	p8@R3HCC1
2.74e-50	FFCP PHASE1:Hg19::chr10:114886533..114886542,+	p48@TCF7L2
2.74e-50	FFCP PHASE2:Hg19::chr19:35788742..35788752,+	p@chr19:35788742..35788752, +
2.74e-50	FFCP PHASE2:Hg19::chr10:114886533..114886542,+	p48@TCF7L2
2.74e-50	FFCP PHASE1:Hg19::chr19:35788742..35788752,+	p@chr19:35788742..35788752, +
4.0e-50	FFCP PHASE1:Hg19::chr14:36367182..36367189,+	p5@ENST00000550089
4.0e-50	FFCP PHASE2:Hg19::chr14:36367182..36367189,+	p5@ENST00000550089
4.52e-50	FFCP PHASE2:Hg19::chrX:134232704..134232705,-	p4@LINC00087
4.52e-50	FFCP PHASE1:Hg19::chr3:155011771..155011808,-	p1@ENST00000489090
4.52e-50	FFCP PHASE2:Hg19::chr4:56229918..56229919,-	p@chr4:56229918..56229919, -
4.52e-50	FFCP PHASE1:Hg19::chr6:143858194..143858197,+	p@chr6:143858194..143858197, +
4.52e-50	FFCP PHASE2:Hg19::chr11:123502025..123502039,-	p22@SCN3B
4.52e-50	FFCP PHASE1:Hg19::chrX:134232704..134232705,-	p4@LINC00087
4.52e-50	FFCP PHASE2:Hg19::chrX:1481635..1481645,-	p@chrX:1481635..1481645, -
4.52e-50	FFCP PHASE2:Hg19::chr7:107883711..107883718,-	p29@NRCAM
4.52e-50	FFCP PHASE1:Hg19::chr4:56229918..56229919,-	p@chr4:56229918..56229919, -
4.52e-50	FFCP PHASE2:Hg19::chr3:155011771..155011808,-	p1@ENST00000489090
4.52e-50	FFCP PHASE1:Hg19::chrX:1481635..1481645,-	p@chrX:1481635..1481645, -
4.52e-50	FFCP PHASE1:Hg19::chr11:123502025..123502039,-	p22@SCN3B
4.52e-50	FFCP PHASE2:Hg19::chr6:143858194..143858197,+	p@chr6:143858194..143858197, +
4.52e-50	FFCP PHASE1:Hg19::chr7:107883711..107883718,-	p29@NRCAM
8.5e-50	FFCP PHASE1:Hg19::chr5:132111925..132111938,+	p@chr5:132111925..132111938, +
8.5e-50	FFCP PHASE2:Hg19::chr5:132111925..132111938,+	p@chr5:132111925..132111938, +
1.09e-49	FFCP PHASE2:Hg19::chr4:159175135..159175146,+	p@chr4:159175135..159175146, +
1.09e-49	FFCP PHASE2:Hg19::chr18:74692038..74692048,+	p@chr18:74692038..74692048, +
1.09e-49	FFCP PHASE1:Hg19::chr4:159175135..159175146,+	p@chr4:159175135..159175146, +
1.09e-49	FFCP PHASE1:Hg19::chr18:74692038..74692048,+	p@chr18:74692038..74692048, +
2.55e-45	FFCP PHASE1:Hg19::chr7:35756400..35756409,+	p4@ENST00000458087, p4@uc003tew.1
2.55e-45	FFCP PHASE2:Hg19::chr7:35756400..35756409,+	p4@ENST00000458087, p4@uc003tew.1
4.0e-45	FFCP PHASE2:Hg19::chr3:50306390..50306399,+	p8@SEMA3B
4.0e-45	FFCP PHASE1:Hg19::chr3:50306390..50306399,+	p8@SEMA3B
5.0e-45	FFCP PHASE2:Hg19::chr3:42687264..42687266,-	p@chr3:42687264..42687266, -
5.0e-45	FFCP PHASE1:Hg19::chr3:42687264..42687266,-	p@chr3:42687264..42687266, -
6.26e-45	FFCP PHASE2:Hg19::chr7:30198187..30198200,+	p@chr7:30198187..30198200, +
6.26e-45	FFCP PHASE1:Hg19::chr7:30198187..30198200,+	p@chr7:30198187..30198200, +
7.83e-45	FFCP PHASE1:Hg19::chr12:26191828..26191840,+	p@chr12:26191828..26191840, +
7.83e-45	FFCP PHASE1:Hg19::chr2:74667046..74667051,-	p20@RTKN
7.83e-45	FFCP PHASE2:Hg19::chr12:26191828..26191840,+	p@chr12:26191828..26191840, +
7.83e-45	FFCP PHASE2:Hg19::chr2:74667046..74667051,-	p20@RTKN
9.79e-45	FFCP PHASE2:Hg19::chr4:95972775..95972786,+	p16@BMPR1B
9.79e-45	FFCP PHASE1:Hg19::chr4:95972775..95972786,+	p16@BMPR1B
1.22e-44	FFCP PHASE2:Hg19::chr4:167759804..167759851,-	p@chr4:167759804..167759851, -
1.22e-44	FFCP PHASE1:Hg19::chr4:167759804..167759851,-	p@chr4:167759804..167759851, -
1.53e-44	FFCP PHASE1:Hg19::chr5:148442824..148442835,+	p4@ENST00000515519
1.53e-44	FFCP PHASE2:Hg19::chr4:158493753..158493770,+	p1@ENST00000455598
1.53e-44	FFCP PHASE1:Hg19::chr4:158493753..158493770,+	p1@ENST00000455598
1.53e-44	FFCP PHASE2:Hg19::chr5:148442824..148442835,+	p4@ENST00000515519
2.98e-44	FFCP PHASE2:Hg19::chrX:103046902..103046909,+	p@chrX:103046902..103046909, +
2.98e-44	FFCP PHASE1:Hg19::chrX:103046902..103046909,+	p@chrX:103046902..103046909, +
3.99e-41	FFCP PHASE1:Hg19::chr2:58134822..58134832,+	p9@VRK2
3.99e-41	FFCP PHASE2:Hg19::chr2:58134822..58134832,+	p9@VRK2
4.89e-41	FFCP PHASE2:Hg19::chr1:84413166..84413168,-	p4@TTLL7
4.89e-41	FFCP PHASE1:Hg19::chr1:84413166..84413168,-	p4@TTLL7
5.99e-41	FFCP PHASE1:Hg19::chr10:64133988..64133999,-	p@chr10:64133988..64133999, -
5.99e-41	FFCP PHASE2:Hg19::chr10:64133988..64133999,-	p@chr10:64133988..64133999, -
7.33e-41	FFCP PHASE2:Hg19::chr16:83741439..83741440,-	p@chr16:83741439..83741440, -
7.33e-41	FFCP PHASE1:Hg19::chr16:83741439..83741440,-	p@chr16:83741439..83741440, -
1.1e-40	FFCP PHASE1:Hg19::chr11:119846813..119846826,+	p@chr11:119846813..119846826, +
1.1e-40	FFCP PHASE2:Hg19::chr16:19612967..19612983,+	p7@C16orf62
1.1e-40	FFCP PHASE2:Hg19::chr11:119846813..119846826,+	p@chr11:119846813..119846826, +
1.1e-40	FFCP PHASE1:Hg19::chr16:19612967..19612983,+	p7@C16orf62
2.01e-40	FFCP PHASE1:Hg19::chr19:35783038..35783039,+	p4@MAG
2.01e-40	FFCP PHASE1:Hg19::chr21:22175450..22175461,-	p2@LINC00320
2.01e-40	FFCP PHASE2:Hg19::chr19:35783038..35783039,+	p4@MAG
2.01e-40	FFCP PHASE2:Hg19::chr21:22175450..22175461,-	p2@LINC00320
3.01e-40	FFCP PHASE1:Hg19::chr11:113078055..113078071,+	p@chr11:113078055..113078071, +
3.01e-40	FFCP PHASE2:Hg19::chr11:113078055..113078071,+	p@chr11:113078055..113078071, +
5.49e-40	FFCP PHASE1:Hg19::chr11:47616800..47616812,-	p@chr11:47616800..47616812, -
5.49e-40	FFCP PHASE2:Hg19::chr11:47616800..47616812,-	p@chr11:47616800..47616812, -
3.28e-37	FFCP PHASE2:Hg19::chr1:204839880..204839889,+	p7@NFASC
3.28e-37	FFCP PHASE1:Hg19::chr1:204839880..204839889,+	p7@NFASC
4.73e-37	FFCP PHASE1:Hg19::chr3:58551936..58551947,+	p@chr3:58551936..58551947, +
4.73e-37	FFCP PHASE1:Hg19::chr21:18885024..18885035,+	p4@CXADR

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