UBERON:0010712
From FANTOM5_SSTAR
Name: | limb skeleton subdivision | |
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Namespace: | FANTOM | |
Definition: | "Skeletal subdivision that is a segment of the limb skeleton." [VSAO:0005018, VSAO:NI] | |
Xrefs: |
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Comments: | Editor notes - note the distinction between this and skeleton of limb |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0010912(subdivision of skeleton) |
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part_of: | UBERON:0002101(limb),UBERON:0002091(appendicular skeleton),UBERON:0002101(limb) |
Children
is a: | UBERON:0004381 (skeleton of limb) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 1350-25C3 (bone (os femoris), neonate N20)
- 1525-43A6 (bone (os femoris), neonate N16)
- 1985-43F5 (bone (os femoris), neonate N02)
- 56-12G2 (bone (os femoris), adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010712 (limb skeleton subdivision), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data