UBERON:0002321: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002321
|name=extraglomerular mesangium
|namespace=
|def=
|xref=EMAPA:28278;;FMA:84141;;MA:0002602
|is_a=UBERON:0003567;;UBERON:0003891;;UBERON:00041...") |
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|part_of=UBERON:0001229;;UBERON:0002303;;UBERON:0002319 | |part_of=UBERON:0001229;;UBERON:0002303;;UBERON:0002319 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:16, 15 June 2012
Name: | extraglomerular mesangium | |
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Xrefs: |
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Comments: | editor note - check MA part_ofs - should be spatially disjoint from renal glomerulus? | |
Alt_id: | UBERON:FMA_84141-MA_0002602 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003567(abdomen connective tissue),UBERON:0003891(stroma),UBERON:0004120(mesoderm-derived structure) |
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part_of: | UBERON:0001229(renal corpuscle),UBERON:0002303(juxtaglomerular apparatus),UBERON:0002319(mesangium) |
Children
part of: | CL:0002173 (extraglomerular mesangial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002321 (extraglomerular mesangium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data