Personal tools

UBERON:0005169: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0005169 |name=interstitial tissue |namespace= |def="connective tissue between the cellular elements of a structure." [http://medical-dictionary.thefree...")
 
No edit summary
Line 21: Line 21:
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:21, 15 June 2012

Name:interstitial tissue
Definition:"connective tissue between the cellular elements of a structure." [1]
Xrefs:
links:

FMA:86301

SCTID:85293002
Synonyms: "interstitium" EXACT []
Comments:todo - make connective tissue

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003891(stroma)



Children

is a:UBERON:0005215 (kidney interstitium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005169 (interstitial tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data