UBERON:0007806

Name:	connecting stalk
Definition:	"A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord." [Medical_Dictionary:http\://medical-dictionary.thefreedictionary.com/]
Xrefs:	Expandlinks: BTO:0004705 ncithesaurus:Connecting_Stalk
Comments:	todo - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

---

Parents

is_a:	UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure)
develops_from:	UBERON:0005728(extraembryonic mesoderm)

Children

develops from:	UBERON:0002331 (umbilical cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

---

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007806 (connecting stalk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

---

Copy Excel CSV PDF

Search:

P-value	FFCP	Short description

P-value	FFCP	Short description
5.79e-79	FFCP PHASE1:Hg19::chr7:135931480..135931486,+	p@chr7:135931480..135931486, +
5.79e-79	FFCP PHASE2:Hg19::chr10:120921270..120921282,-	p@chr10:120921270..120921282, -
5.79e-79	FFCP PHASE2:Hg19::chr7:135931480..135931486,+	p@chr7:135931480..135931486, +
5.79e-79	FFCP PHASE1:Hg19::chr10:120921270..120921282,-	p@chr10:120921270..120921282, -
2.16e-63	FFCP PHASE1:Hg19::chr1:205744117..205744127,-	p8@RAB7L1
2.16e-63	FFCP PHASE2:Hg19::chr1:205744117..205744127,-	p8@RAB7L1
1.1e-59	FFCP PHASE1:Hg19::chr9:75002215..75002221,-	p@chr9:75002215..75002221, -
1.1e-59	FFCP PHASE2:Hg19::chr7:135705366..135705371,+	p@chr7:135705366..135705371, +
1.1e-59	FFCP PHASE2:Hg19::chr21:18179708..18179733,-	p@chr21:18179708..18179733, -
1.1e-59	FFCP PHASE1:Hg19::chr2:228216837..228216846,+	p17@MFF
1.1e-59	FFCP PHASE1:Hg19::chr19:31524425..31524444,-	p@chr19:31524425..31524444, -
1.1e-59	FFCP PHASE2:Hg19::chr9:74995216..74995247,-	p@chr9:74995216..74995247, -
1.1e-59	FFCP PHASE1:Hg19::chr20:39574012..39574015,+	p@chr20:39574012..39574015, +
1.1e-59	FFCP PHASE2:Hg19::chr6:87324188..87324195,+	p@chr6:87324188..87324195, +
1.1e-59	FFCP PHASE2:Hg19::chr3:45926316..45926329,-	p@chr3:45926316..45926329, -
1.1e-59	FFCP PHASE1:Hg19::chr8:12548586..12548602,-	p@chr8:12548586..12548602, -
1.1e-59	FFCP PHASE1:Hg19::chr2:148279057..148279078,+	p@chr2:148279057..148279078, +
1.1e-59	FFCP PHASE1:Hg19::chr1:172807491..172807499,-	p@chr1:172807491..172807499, -
1.1e-59	FFCP PHASE1:Hg19::chr14:76957814..76957826,+	p@chr14:76957814..76957826, +
1.1e-59	FFCP PHASE2:Hg19::chrX:109653507..109653518,+	p@chrX:109653507..109653518, +
1.1e-59	FFCP PHASE1:Hg19::chr4:167748986..167748989,-	p@chr4:167748986..167748989, -
1.1e-59	FFCP PHASE1:Hg19::chr10:61574767..61574776,-	p@chr10:61574767..61574776, -
1.1e-59	FFCP PHASE2:Hg19::chr19:53511711..53511720,-	p@chr19:53511711..53511720, -
1.1e-59	FFCP PHASE2:Hg19::chr10:111805635..111805642,-	p@chr10:111805635..111805642, -
1.1e-59	FFCP PHASE1:Hg19::chr8:42248931..42248936,+	p6@VDAC3
1.1e-59	FFCP PHASE1:Hg19::chr19:10987850..10987854,+	p@chr19:10987850..10987854, +
1.1e-59	FFCP PHASE2:Hg19::chr10:15013428..15013456,-	p@chr10:15013428..15013456, -
1.1e-59	FFCP PHASE1:Hg19::chr11:90524493..90524505,+	p@chr11:90524493..90524505, +
1.1e-59	FFCP PHASE1:Hg19::chr10:120921294..120921306,-	p@chr10:120921294..120921306, -
1.1e-59	FFCP PHASE2:Hg19::chrX:10129292..10129306,+	p@chrX:10129292..10129306, +
1.1e-59	FFCP PHASE2:Hg19::chr6:150322254..150322291,-	p@chr6:150322254..150322291, -
1.1e-59	FFCP PHASE1:Hg19::chr12:24770576..24770594,-	p@chr12:24770576..24770594, -
1.1e-59	FFCP PHASE2:Hg19::chr5:77713534..77713543,+	p@chr5:77713534..77713543, +
1.1e-59	FFCP PHASE1:Hg19::chr9:74981579..74981583,-	p@chr9:74981579..74981583, -
1.1e-59	FFCP PHASE1:Hg19::chr1:207627342..207627349,+	p3@CR2
1.1e-59	FFCP PHASE1:Hg19::chr6:484706..484722,+	p@chr6:484706..484722, +
1.1e-59	FFCP PHASE1:Hg19::chr4:167982726..167982736,-	p@chr4:167982726..167982736, -
1.1e-59	FFCP PHASE2:Hg19::chr6:135486487..135486491,+	p@chr6:135486487..135486491, +
1.1e-59	FFCP PHASE2:Hg19::chr5:146717844..146717861,+	p@chr5:146717844..146717861, +
1.1e-59	FFCP PHASE2:Hg19::chr2:74682916..74682923,+	p@chr2:74682916..74682923, +
1.1e-59	FFCP PHASE2:Hg19::chr2:15651894..15651904,-	p4@NBAS
1.1e-59	FFCP PHASE1:Hg19::chr6:87324200..87324219,+	p@chr6:87324200..87324219, +
1.1e-59	FFCP PHASE1:Hg19::chr3:45926344..45926350,-	p@chr3:45926344..45926350, -
1.1e-59	FFCP PHASE2:Hg19::chr4:167944606..167944610,-	p@chr4:167944606..167944610, -
1.1e-59	FFCP PHASE2:Hg19::chr8:56618992..56618998,+	p@chr8:56618992..56618998, +
1.1e-59	FFCP PHASE2:Hg19::chr2:228216568..228216578,+	p15@MFF
1.1e-59	FFCP PHASE1:Hg19::chr17:1985278..1985290,-	p@chr17:1985278..1985290, -
1.1e-59	FFCP PHASE2:Hg19::chr8:59970765..59970787,-	p@chr8:59970765..59970787, -
1.1e-59	FFCP PHASE1:Hg19::chr12:130530197..130530209,-	p@chr12:130530197..130530209, -
1.1e-59	FFCP PHASE2:Hg19::chr20:33691683..33691699,+	p@chr20:33691683..33691699, +
1.1e-59	FFCP PHASE2:Hg19::chr7:106397597..106397610,+	p@chr7:106397597..106397610, +
1.1e-59	FFCP PHASE2:Hg19::chr6:31150998..31151005,-	p@chr6:31150998..31151005, -
1.1e-59	FFCP PHASE2:Hg19::chr3:153038353..153038371,+	p@chr3:153038353..153038371, +
1.1e-59	FFCP PHASE2:Hg19::chr2:148278743..148278751,+	p@chr2:148278743..148278751, +
1.1e-59	FFCP PHASE2:Hg19::chr7:135738522..135738525,-	p@chr7:135738522..135738525, -
1.1e-59	FFCP PHASE2:Hg19::chr17:40021018..40021028,+	p@chr17:40021018..40021028, +
1.1e-59	FFCP PHASE2:Hg19::chr12:24770576..24770594,-	p@chr12:24770576..24770594, -
1.1e-59	FFCP PHASE2:Hg19::chr11:129247710..129247730,+	p@chr11:129247710..129247730, +
1.1e-59	FFCP PHASE1:Hg19::chr7:45954712..45954720,-	p41@IGFBP3
1.1e-59	FFCP PHASE2:Hg19::chr9:75001932..75001956,-	p@chr9:75001932..75001956, -
1.1e-59	FFCP PHASE1:Hg19::chrX:146004822..146004839,-	p@chrX:146004822..146004839, -
1.1e-59	FFCP PHASE1:Hg19::chr10:15035430..15035449,-	p@chr10:15035430..15035449, -
1.1e-59	FFCP PHASE2:Hg19::chr19:3149800..3149805,+	p@chr19:3149800..3149805, +
1.1e-59	FFCP PHASE1:Hg19::chr6:135486309..135486312,+	p@chr6:135486309..135486312, +
1.1e-59	FFCP PHASE1:Hg19::chr2:148296759..148296767,+	p@chr2:148296759..148296767, +
1.1e-59	FFCP PHASE2:Hg19::chr3:169775687..169775690,-	p@chr3:169775687..169775690, -
1.1e-59	FFCP PHASE2:Hg19::chr12:130530197..130530209,-	p@chr12:130530197..130530209, -
1.1e-59	FFCP PHASE1:Hg19::chr8:56625901..56625913,+	p@chr8:56625901..56625913, +
1.1e-59	FFCP PHASE1:Hg19::chr2:228216588..228216609,+	p10@MFF
1.1e-59	FFCP PHASE1:Hg19::chr19:18603318..18603327,-	p@chr19:18603318..18603327, -
1.1e-59	FFCP PHASE2:Hg19::chr6:138023154..138023161,-	p@chr6:138023154..138023161, -
1.1e-59	FFCP PHASE2:Hg19::chr5:162742836..162742845,-	p@chr5:162742836..162742845, -
1.1e-59	FFCP PHASE2:Hg19::chr3:111331533..111331540,-	p@chr3:111331533..111331540, -
1.1e-59	FFCP PHASE2:Hg19::chr4:182684840..182684848,+	p@chr4:182684840..182684848, +
1.1e-59	FFCP PHASE2:Hg19::chr3:33024873..33024877,-	p@chr3:33024873..33024877, -
1.1e-59	FFCP PHASE2:Hg19::chr19:10983266..10983276,-	p@chr19:10983266..10983276, -
1.1e-59	FFCP PHASE1:Hg19::chr1:168204286..168204299,+	p@chr1:168204286..168204299, +
1.1e-59	FFCP PHASE1:Hg19::chr19:53511768..53511784,-	p@chr19:53511768..53511784, -
1.1e-59	FFCP PHASE1:Hg19::chr7:135705408..135705462,+	p@chr7:135705408..135705462, +
1.1e-59	FFCP PHASE1:Hg19::chr21:18180040..18180058,-	p@chr21:18180040..18180058, -
1.1e-59	FFCP PHASE2:Hg19::chr4:85688154..85688161,-	p@chr4:85688154..85688161, -
1.1e-59	FFCP PHASE1:Hg19::chr3:195306394..195306429,-	p5@APOD
1.1e-59	FFCP PHASE2:Hg19::chr6:137816618..137816627,-	p@chr6:137816618..137816627, -
1.1e-59	FFCP PHASE2:Hg19::chr15:43323772..43323785,-	p@chr15:43323772..43323785, -
1.1e-59	FFCP PHASE1:Hg19::chrX:10129363..10129369,+	p@chrX:10129363..10129369, +
1.1e-59	FFCP PHASE1:Hg19::chr20:22771662..22771675,+	p@chr20:22771662..22771675, +
1.1e-59	FFCP PHASE1:Hg19::chr1:234631379..234631392,-	p@chr1:234631379..234631392, -
1.1e-59	FFCP PHASE2:Hg19::chr6:484679..484683,+	p@chr6:484679..484683, +
1.1e-59	FFCP PHASE1:Hg19::chr19:49488858..49488869,-	p@chr19:49488858..49488869, -
1.1e-59	FFCP PHASE2:Hg19::chr2:228216837..228216846,+	p17@MFF
1.1e-59	FFCP PHASE2:Hg19::chr10:61574724..61574737,-	p@chr10:61574724..61574737, -
1.1e-59	FFCP PHASE1:Hg19::chr3:111311854..111311862,-	p@chr3:111311854..111311862, -
1.1e-59	FFCP PHASE2:Hg19::chr2:65209811..65209818,+	p@chr2:65209811..65209818, +
1.1e-59	FFCP PHASE2:Hg19::chr2:148293218..148293252,+	p@chr2:148293218..148293252, +
1.1e-59	FFCP PHASE2:Hg19::chr1:177159780..177159790,-	p@chr1:177159780..177159790, -
1.1e-59	FFCP PHASE2:Hg19::chr14:76957827..76957835,+	p@chr14:76957827..76957835, +
1.1e-59	FFCP PHASE1:Hg19::chr6:149464325..149464336,-	p@chr6:149464325..149464336, -
1.1e-59	FFCP PHASE1:Hg19::chr1:146746588..146746604,+	p5@CHD1L
1.1e-59	FFCP PHASE1:Hg19::chr4:36393818..36393829,-	p2@ENST00000504344
1.1e-59	FFCP PHASE1:Hg19::chr19:42682291..42682301,-	p@chr19:42682291..42682301, -

Showing 1 to 100 of 100 entries