CL:0002057: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0002057
|name=CD14-positive, CD16-negative classical monocyte
|namespace=cell
|def="A monocyte that is CD14-positive, CD16-negative, CD64-positive, CD163-posit...") |
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|name=CD14-positive, CD16-negative classical monocyte | |name=CD14-positive, CD16-negative classical monocyte | ||
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|def="A monocyte that is CD14-positive, CD16-negative, CD64-positive, CD163-positive," [GOC:tfm, PMID:15615263, PMID:1706877, PMID:19689341] | |def="A monocyte that is CD14-positive, CD16-negative, CD64-positive, CD163-positive," [GOC:tfm, PMID:15615263, PMID:1706877, PMID:19689341] | ||
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Revision as of 17:39, 15 June 2012
| Name: | CD14-positive, CD16-negative classical monocyte |
|---|---|
| Namespace: | efo |
| Definition: | "A monocyte that is CD14-positive, CD16-negative, CD64-positive, CD163-positive," [GOC:tfm, PMID:15615263, PMID:1706877, PMID:19689341] |
| Comments: | Markers are associated with human monocytes. |
| Created by: | tmeehan |
| Creation date: | 2010-06-05T08:25:41Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000860(classical monocyte) |
|---|
Children
| derives from: | FF:0011101 (human CD14-positive monocytes - mock treated sample),FF:0011102 (human CD14-positive monocytes - treated with B-glucan sample),FF:0011103 (human CD14-positive monocytes - treated with BCG sample),FF:0011104 (human CD14-positive monocytes - treated with Candida sample),FF:0011105 (human CD14-positive monocytes - treated with Cryptococcus sample),FF:0011106 (human CD14-positive monocytes - treated with Group A streptococci sample),FF:0011108 (human CD14-positive monocytes - treated with lipopolysaccharide sample),FF:0011109 (human CD14-positive monocytes - treated with Salmonella sample),FF:0011111 (human CD14-positive CD16-negative Monocytes sample),FF:0011443 (CD14-positive monocytes - treated with IFN + N-hexane sample),FF:0011444 (CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample) |
|---|---|
| develops from: | CL:0002397 (CD14-positive, CD16-positive monocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11788-124B6 (CD14+CD16- Monocytes, donor1)
- 11799-124C8 (CD14+CD16- Monocytes, donor2)
- 11857-125A3
- 11858-125A4
- 11859-125A5
- 11860-125A6 (CD14+ monocytes - treated with BCG, donor1)
- 11861-125A7 (CD14+ monocytes - treated with IFN + N-hexane, donor1)
- 11862-125A8 (CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor1)
- 11863-125A9 (CD14+ monocytes - mock treated, donor1)
- 11864-125B1 (CD14+ monocytes - treated with Group A streptococci, donor1)
... further results Mouse (Mus musculus)
- 11788-124B6 (CD14+CD16- Monocytes, donor1)
- 11799-124C8 (CD14+CD16- Monocytes, donor2)
- 11857-125A3
- 11858-125A4
- 11859-125A5
- 11860-125A6 (CD14+ monocytes - treated with BCG, donor1)
- 11861-125A7 (CD14+ monocytes - treated with IFN + N-hexane, donor1)
- 11862-125A8 (CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor1)
- 11863-125A9 (CD14+ monocytes - mock treated, donor1)
- 11864-125B1 (CD14+ monocytes - treated with Group A streptococci, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002057 (CD14-positive, CD16-negative classical monocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
