Personal tools

DOID:5093: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 3: Line 3:
|name=thoracic cancer
|name=thoracic cancer
|namespace=disease_ontology
|namespace=disease_ontology
|def="An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http\://www.advocatehealth.com/cmc/body.cfm?id=203]
|def="An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http://www.advocatehealth.com/cmc/body.cfm?id=203]
|xref=MSH:D013899;;NCI:C3406;;SNOMEDCT_2010_1_31:188361007;;SNOMEDCT_2010_1_31:188365003;;SNOMEDCT_2010_1_31:255058005;;UMLS_CUI:C0039981;;UMLS_CUI:C0153661
|xref=MSH:D013899;;NCI:C3406;;SNOMEDCT_2010_1_31:188361007;;SNOMEDCT_2010_1_31:188365003;;SNOMEDCT_2010_1_31:255058005;;UMLS_CUI:C0039981;;UMLS_CUI:C0153661
|is_a=DOID:0050686
|is_a=DOID:0050686
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Revision as of 16:33, 26 June 2012

Name:thoracic cancer
Namespace:disease_ontology
Definition:"An organ system cancer located_in the thoracic cavity that develops in the different types of cells within the lungs, as well as less common cancers of the esophagus, the trachea, or the chest wall." [url:http://www.advocatehealth.com/cmc/body.cfm?id=203]
Xrefs:
links:

MSH:D013899
NCI:C3406
SNOMEDCT_2010_1_31:188361007
SNOMEDCT_2010_1_31:188365003
SNOMEDCT_2010_1_31:255058005
UMLS_CUI:C0039981

UMLS_CUI:C0153661
Synonyms: "Thoracic tumor" EXACT [NCI2004_11_17:C3406]
"thorax cancer" EXACT []
"thorax neoplasm" EXACT [CSP2005:2005-5041]
"tumor of thorax (disorder)" EXACT [SNOMEDCT_2005_07_31:255058005]
Alt_id: DOID:3937

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:1612 (breast cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5093 (thoracic cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data