UBERON:0000115: Difference between revisions
From FANTOM5_SSTAR
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0001041 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0002048 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 13:25, 27 June 2012
| Name: | lung epithelium | |
|---|---|---|
| Definition: | "the epithelial layer of the lung." [MP:0006382] | |
| Xrefs: |
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| Synonyms: |
"epithelial tissue of lung" EXACT [OBOL:automatic] "epithelium of lung" EXACT [OBOL:automatic] "lung epithelial tissue" EXACT [OBOL:automatic] "pulmonary epithelium" RELATED [BTO:0001653] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004802(respiratory tract epithelium) |
|---|---|
| develops_from: | UBERON:0001041(foregut) |
| part_of: | UBERON:0002048(lung) |
Children
| is a: | UBERON:0002169 (alveolar sac),UBERON:0004821 (pulmonary alveolus epithelium) |
|---|---|
| part of: | CL:0000082 (epithelial cell of lung) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
- 10500-107C5
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
- 10502-107C7
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000115 (lung epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
