FFCP PHASE1:Mm9::chr2:148558114..148558191,-: Difference between revisions
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|id=chr2:148558114..148558191,- | |id=chr2:148558114..148558191,- | ||
|ontology_enrichment_celltype=CL:0000540!8.89e-14!33;CL:0000047!8.89e-14!33;CL:0000031!8.89e-14!33;CL:0000404!8.89e-14!33;CL:0000393!7.49e-12!39;CL:0000211!7.49e-12!39;CL:0000117!2.27e-11!23;CL:0000337!2.27e-11!23;CL:0000221!3.32e-09!44;CL:0000133!3.32e-09!44;CL:0002319!3.66e-09!43;CL:0000055!1.07e-07!50 | |ontology_enrichment_celltype=CL:0000540!8.89e-14!33;CL:0000047!8.89e-14!33;CL:0000031!8.89e-14!33;CL:0000404!8.89e-14!33;CL:0000393!7.49e-12!39;CL:0000211!7.49e-12!39;CL:0000117!2.27e-11!23;CL:0000337!2.27e-11!23;CL:0000221!3.32e-09!44;CL:0000133!3.32e-09!44;CL:0002319!3.66e-09!43;CL:0000055!1.07e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.30e-14,33;CL:0000047,8.30e-14,33;CL:0000031,8.30e-14,33;CL:0000404,8.30e-14,33;CL:0000393,7.07e-12,39;CL:0000211,7.07e-12,39;CL:0000117,2.14e-11,23;CL:0000337,2.14e-11,23;CL:0000221,3.80e-09,44;CL:0000133,3.80e-09,44;CL:0002319,4.20e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.14e-26!102;UBERON:0000924!5.14e-26!102;UBERON:0006601!5.14e-26!102;UBERON:0002346!5.44e-24!71;UBERON:0003075!5.44e-24!71;UBERON:0007284!5.44e-24!71;UBERON:0000073!5.84e-24!75;UBERON:0001016!5.84e-24!75;UBERON:0001017!1.35e-23!73;UBERON:0005743!1.35e-23!73;UBERON:0000033!2.35e-21!63;UBERON:0001049!8.31e-19!52;UBERON:0005068!8.31e-19!52;UBERON:0006241!8.31e-19!52;UBERON:0007135!8.31e-19!52;UBERON:0000955!4.94e-18!50;UBERON:0006238!4.94e-18!50;UBERON:0003056!9.26e-18!49;UBERON:0002616!2.22e-17!49;UBERON:0002020!1.03e-15!34;UBERON:0003080!1.11e-14!40;UBERON:0002780!4.59e-14!39;UBERON:0001890!4.59e-14!39;UBERON:0006240!4.59e-14!39;UBERON:0002791!4.52e-13!29;UBERON:0003528!4.52e-13!29;UBERON:0001893!4.52e-13!29;UBERON:0000468!7.05e-10!333;UBERON:0000956!5.27e-09!21;UBERON:0001869!5.27e-09!21;UBERON:0000203!5.27e-09!21;UBERON:0007811!1.37e-08!86;UBERON:0000153!4.16e-08!94;UBERON:0002619!6.32e-08!17;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10 | |ontology_enrichment_uberon=UBERON:0004121!5.14e-26!102;UBERON:0000924!5.14e-26!102;UBERON:0006601!5.14e-26!102;UBERON:0002346!5.44e-24!71;UBERON:0003075!5.44e-24!71;UBERON:0007284!5.44e-24!71;UBERON:0000073!5.84e-24!75;UBERON:0001016!5.84e-24!75;UBERON:0001017!1.35e-23!73;UBERON:0005743!1.35e-23!73;UBERON:0000033!2.35e-21!63;UBERON:0001049!8.31e-19!52;UBERON:0005068!8.31e-19!52;UBERON:0006241!8.31e-19!52;UBERON:0007135!8.31e-19!52;UBERON:0000955!4.94e-18!50;UBERON:0006238!4.94e-18!50;UBERON:0003056!9.26e-18!49;UBERON:0002616!2.22e-17!49;UBERON:0002020!1.03e-15!34;UBERON:0003080!1.11e-14!40;UBERON:0002780!4.59e-14!39;UBERON:0001890!4.59e-14!39;UBERON:0006240!4.59e-14!39;UBERON:0002791!4.52e-13!29;UBERON:0003528!4.52e-13!29;UBERON:0001893!4.52e-13!29;UBERON:0000468!7.05e-10!333;UBERON:0000956!5.27e-09!21;UBERON:0001869!5.27e-09!21;UBERON:0000203!5.27e-09!21;UBERON:0007811!1.37e-08!86;UBERON:0000153!4.16e-08!94;UBERON:0002619!6.32e-08!17;UBERON:0002021!7.61e-08!10;UBERON:0000411!7.61e-08!10;UBERON:0001950!7.61e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.17e-25,95;UBERON:0000924,6.17e-25,95;UBERON:0006601,6.17e-25,95;UBERON:0001016,6.56e-24,75;UBERON:0001017,1.52e-23,73;UBERON:0002346,2.38e-23,64;UBERON:0003075,2.38e-23,64;UBERON:0007284,2.38e-23,64;UBERON:0010371,1.15e-20,73;UBERON:0000073,4.42e-20,54;UBERON:0001049,9.66e-19,52;UBERON:0005068,9.66e-19,52;UBERON:0006241,9.66e-19,52;UBERON:0007135,9.66e-19,52;UBERON:0010314,5.23e-18,92;UBERON:0003056,1.08e-17,49;UBERON:0000955,4.82e-16,47;UBERON:0006238,4.82e-16,47;UBERON:0002020,1.24e-15,34;UBERON:0002616,2.07e-15,46;UBERON:0003080,1.31e-14,40;UBERON:0002780,5.43e-14,39;UBERON:0001890,5.43e-14,39;UBERON:0006240,5.43e-14,39;UBERON:0003528,5.51e-13,29;UBERON:0002791,5.51e-13,29;UBERON:0001893,5.51e-13,29;UBERON:0000956,6.46e-09,21;UBERON:0001869,6.46e-09,21;UBERON:0000203,6.46e-09,21;UBERON:0002021,7.34e-08,10;UBERON:0000411,7.34e-08,10;UBERON:0001950,7.34e-08,10;UBERON:0002619,7.85e-08,17 | |||
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| ||
|short_description=p1@Napb | |short_description=p1@Napb | ||
}} | }} |
Revision as of 14:07, 13 November 2012
Short description: | p1@Napb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Napb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000136513, ENSMUST00000140647, NM_019632, uc008mti.1_5end |
EntrezGene: | Napb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.30e-14 | 33 |
neuronal stem cell | 8.30e-14 | 33 |
neuroblast | 8.30e-14 | 33 |
electrically signaling cell | 8.30e-14 | 33 |
electrically responsive cell | 7.07e-12 | 39 |
electrically active cell | 7.07e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-11 | 23 |
ectodermal cell | 3.80e-09 | 44 |
neurectodermal cell | 3.80e-09 | 44 |
neural cell | 4.20e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.17e-25 | 95 |
ectoderm | 6.17e-25 | 95 |
presumptive ectoderm | 6.17e-25 | 95 |
nervous system | 6.56e-24 | 75 |
central nervous system | 1.52e-23 | 73 |
neurectoderm | 2.38e-23 | 64 |
neural plate | 2.38e-23 | 64 |
presumptive neural plate | 2.38e-23 | 64 |
ecto-epithelium | 1.15e-20 | 73 |
regional part of nervous system | 4.42e-20 | 54 |
neural tube | 9.66e-19 | 52 |
neural rod | 9.66e-19 | 52 |
future spinal cord | 9.66e-19 | 52 |
neural keel | 9.66e-19 | 52 |
structure with developmental contribution from neural crest | 5.23e-18 | 92 |
pre-chordal neural plate | 1.08e-17 | 49 |
brain | 4.82e-16 | 47 |
future brain | 4.82e-16 | 47 |
gray matter | 1.24e-15 | 34 |
regional part of brain | 2.07e-15 | 46 |
anterior neural tube | 1.31e-14 | 40 |
regional part of forebrain | 5.43e-14 | 39 |
forebrain | 5.43e-14 | 39 |
future forebrain | 5.43e-14 | 39 |
brain grey matter | 5.51e-13 | 29 |
regional part of telencephalon | 5.51e-13 | 29 |
telencephalon | 5.51e-13 | 29 |
cerebral cortex | 6.46e-09 | 21 |
cerebral hemisphere | 6.46e-09 | 21 |
pallium | 6.46e-09 | 21 |
occipital lobe | 7.34e-08 | 10 |
visual cortex | 7.34e-08 | 10 |
neocortex | 7.34e-08 | 10 |
regional part of cerebral cortex | 7.85e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.