FFCP PHASE1:Mm9::chr10:18189764..18189780,+: Difference between revisions
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|id=chr10:18189764..18189780,+ | |id=chr10:18189764..18189780,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.31e-07,9;CL:0002251,3.31e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.16e-11!43;UBERON:0000344!3.72e-10!15;UBERON:0005409!3.26e-09!59;UBERON:0005156!5.30e-09!26;UBERON:0000990!5.30e-09!26;UBERON:0001242!7.65e-09!13;UBERON:0000060!7.65e-09!13;UBERON:0001262!7.65e-09!13;UBERON:0004786!7.65e-09!13;UBERON:0003133!1.50e-08!24;UBERON:0003101!2.03e-08!16;UBERON:0000079!2.03e-08!16;UBERON:0003135!3.33e-08!15;UBERON:0000473!1.36e-07!14;UBERON:0000991!1.89e-07!18;UBERON:0005564!1.89e-07!18;UBERON:0001008!2.84e-07!17;UBERON:0004176!3.08e-07!17;UBERON:0009196!3.08e-07!17;UBERON:0009117!3.08e-07!17;UBERON:0006554!4.09e-07!16;UBERON:0002113!4.38e-07!14;UBERON:0003918!4.38e-07!14;UBERON:0005095!4.38e-07!14;UBERON:0007687!4.38e-07!14;UBERON:0000489!5.74e-07!21;UBERON:0000485!5.86e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!2.16e-11!43;UBERON:0000344!3.72e-10!15;UBERON:0005409!3.26e-09!59;UBERON:0005156!5.30e-09!26;UBERON:0000990!5.30e-09!26;UBERON:0001242!7.65e-09!13;UBERON:0000060!7.65e-09!13;UBERON:0001262!7.65e-09!13;UBERON:0004786!7.65e-09!13;UBERON:0003133!1.50e-08!24;UBERON:0003101!2.03e-08!16;UBERON:0000079!2.03e-08!16;UBERON:0003135!3.33e-08!15;UBERON:0000473!1.36e-07!14;UBERON:0000991!1.89e-07!18;UBERON:0005564!1.89e-07!18;UBERON:0001008!2.84e-07!17;UBERON:0004176!3.08e-07!17;UBERON:0009196!3.08e-07!17;UBERON:0009117!3.08e-07!17;UBERON:0006554!4.09e-07!16;UBERON:0002113!4.38e-07!14;UBERON:0003918!4.38e-07!14;UBERON:0005095!4.38e-07!14;UBERON:0007687!4.38e-07!14;UBERON:0000489!5.74e-07!21;UBERON:0000485!5.86e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.95e-20,31;UBERON:0005409,7.30e-15,47;UBERON:0000344,5.43e-12,15;UBERON:0001242,2.12e-10,13;UBERON:0001262,2.12e-10,13;UBERON:0004786,2.12e-10,13;UBERON:0003101,6.91e-10,16;UBERON:0000079,6.91e-10,16;UBERON:0003135,1.26e-09,15;UBERON:0005156,2.78e-09,26;UBERON:0000990,2.78e-09,26;UBERON:0000473,6.91e-09,14;UBERON:0003133,9.91e-09,24;UBERON:0002113,2.86e-08,14;UBERON:0003918,2.86e-08,14;UBERON:0011143,2.86e-08,14;UBERON:0005095,2.86e-08,14;UBERON:0007687,2.86e-08,14;UBERON:0000991,3.56e-08,18;UBERON:0005564,3.56e-08,18;UBERON:0000485,4.06e-08,11;UBERON:0004176,6.53e-08,17;UBERON:0009196,6.53e-08,17;UBERON:0009117,6.53e-08,17;UBERON:0003350,3.31e-07,9;UBERON:0004808,3.31e-07,9;UBERON:0001277,3.31e-07,9 | |||
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| ||
|short_description=p1@Nhsl1 | |short_description=p1@Nhsl1 | ||
}} | }} |
Revision as of 15:17, 13 November 2012
Short description: | p1@Nhsl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nhsl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000160600_5end |
EntrezGene: | Nhsl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.31e-07 | 9 |
epithelial cell of alimentary canal | 3.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.95e-20 | 31 |
gastrointestinal system | 7.30e-15 | 47 |
mucosa | 5.43e-12 | 15 |
intestinal mucosa | 2.12e-10 | 13 |
wall of intestine | 2.12e-10 | 13 |
gastrointestinal system mucosa | 2.12e-10 | 13 |
male organism | 6.91e-10 | 16 |
male reproductive system | 6.91e-10 | 16 |
male reproductive organ | 1.26e-09 | 15 |
reproductive structure | 2.78e-09 | 26 |
reproductive system | 2.78e-09 | 26 |
testis | 6.91e-09 | 14 |
reproductive organ | 9.91e-09 | 24 |
kidney | 2.86e-08 | 14 |
kidney mesenchyme | 2.86e-08 | 14 |
upper urinary tract | 2.86e-08 | 14 |
kidney rudiment | 2.86e-08 | 14 |
kidney field | 2.86e-08 | 14 |
gonad | 3.56e-08 | 18 |
gonad primordium | 3.56e-08 | 18 |
simple columnar epithelium | 4.06e-08 | 11 |
external genitalia | 6.53e-08 | 17 |
indifferent external genitalia | 6.53e-08 | 17 |
indifferent gonad | 6.53e-08 | 17 |
epithelium of mucosa | 3.31e-07 | 9 |
gastrointestinal system epithelium | 3.31e-07 | 9 |
intestinal epithelium | 3.31e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.