FFCP PHASE1:Mm9::chr16:4879810..4879836,-: Difference between revisions
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|id=chr16:4879810..4879836,- | |id=chr16:4879810..4879836,- | ||
|ontology_enrichment_celltype=CL:0000034!1.62e-11!97;CL:0000723!1.52e-10!91;CL:0000048!1.52e-10!91;CL:0000117!2.08e-07!23;CL:0000337!2.08e-07!23 | |ontology_enrichment_celltype=CL:0000034!1.62e-11!97;CL:0000723!1.52e-10!91;CL:0000048!1.52e-10!91;CL:0000117!2.08e-07!23;CL:0000337!2.08e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.62e-11,97;CL:0000723,1.52e-10,91;CL:0000048,1.52e-10,91;CL:0000117,2.08e-07,23;CL:0000337,2.08e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.31e-15!73;UBERON:0005743!3.31e-15!73;UBERON:0000073!1.95e-14!75;UBERON:0001016!1.95e-14!75;UBERON:0001049!8.07e-14!52;UBERON:0005068!8.07e-14!52;UBERON:0006241!8.07e-14!52;UBERON:0007135!8.07e-14!52;UBERON:0000955!1.15e-13!50;UBERON:0006238!1.15e-13!50;UBERON:0002616!4.59e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0004121!1.20e-11!102;UBERON:0000924!1.20e-11!102;UBERON:0006601!1.20e-11!102;UBERON:0002791!4.86e-11!29;UBERON:0003528!4.86e-11!29;UBERON:0001893!4.86e-11!29;UBERON:0000033!6.73e-10!63;UBERON:0003080!1.67e-09!40;UBERON:0002780!5.58e-09!39;UBERON:0001890!5.58e-09!39;UBERON:0006240!5.58e-09!39;UBERON:0000956!2.69e-08!21;UBERON:0001869!2.69e-08!21;UBERON:0000203!2.69e-08!21;UBERON:0007023!2.71e-08!51;UBERON:0002346!8.56e-08!71;UBERON:0003075!8.56e-08!71;UBERON:0007284!8.56e-08!71;UBERON:0002619!8.84e-08!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000153!3.25e-07!94;UBERON:0007811!5.46e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!3.31e-15!73;UBERON:0005743!3.31e-15!73;UBERON:0000073!1.95e-14!75;UBERON:0001016!1.95e-14!75;UBERON:0001049!8.07e-14!52;UBERON:0005068!8.07e-14!52;UBERON:0006241!8.07e-14!52;UBERON:0007135!8.07e-14!52;UBERON:0000955!1.15e-13!50;UBERON:0006238!1.15e-13!50;UBERON:0002616!4.59e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0004121!1.20e-11!102;UBERON:0000924!1.20e-11!102;UBERON:0006601!1.20e-11!102;UBERON:0002791!4.86e-11!29;UBERON:0003528!4.86e-11!29;UBERON:0001893!4.86e-11!29;UBERON:0000033!6.73e-10!63;UBERON:0003080!1.67e-09!40;UBERON:0002780!5.58e-09!39;UBERON:0001890!5.58e-09!39;UBERON:0006240!5.58e-09!39;UBERON:0000956!2.69e-08!21;UBERON:0001869!2.69e-08!21;UBERON:0000203!2.69e-08!21;UBERON:0007023!2.71e-08!51;UBERON:0002346!8.56e-08!71;UBERON:0003075!8.56e-08!71;UBERON:0007284!8.56e-08!71;UBERON:0002619!8.84e-08!17;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10;UBERON:0000153!3.25e-07!94;UBERON:0007811!5.46e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-15,73;UBERON:0000073,6.37e-15,54;UBERON:0001016,1.95e-14,75;UBERON:0001049,8.07e-14,52;UBERON:0005068,8.07e-14,52;UBERON:0006241,8.07e-14,52;UBERON:0007135,8.07e-14,52;UBERON:0004121,1.08e-13,95;UBERON:0000924,1.08e-13,95;UBERON:0006601,1.08e-13,95;UBERON:0002020,8.07e-13,34;UBERON:0000955,4.91e-12,47;UBERON:0006238,4.91e-12,47;UBERON:0002616,1.87e-11,46;UBERON:0003528,4.86e-11,29;UBERON:0002791,4.86e-11,29;UBERON:0001893,4.86e-11,29;UBERON:0010371,2.64e-10,73;UBERON:0002346,8.34e-10,64;UBERON:0003075,8.34e-10,64;UBERON:0007284,8.34e-10,64;UBERON:0003080,1.67e-09,40;UBERON:0002780,5.58e-09,39;UBERON:0001890,5.58e-09,39;UBERON:0006240,5.58e-09,39;UBERON:0000956,2.69e-08,21;UBERON:0001869,2.69e-08,21;UBERON:0000203,2.69e-08,21;UBERON:0007023,2.71e-08,51;UBERON:0002619,8.84e-08,17;UBERON:0002021,1.19e-07,10;UBERON:0000411,1.19e-07,10;UBERON:0001950,1.19e-07,10 | |||
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| ||
|short_description=p1@Fam100a | |short_description=p1@Fam100a | ||
}} | }} |
Revision as of 17:57, 13 November 2012
Short description: | p1@Fam100a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam100a_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | -5bp_to_ENSMUST00000143873_5end |
EntrezGene: | Fam100a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.62e-11 | 97 |
somatic stem cell | 1.52e-10 | 91 |
multi fate stem cell | 1.52e-10 | 91 |
CNS neuron (sensu Vertebrata) | 2.08e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.31e-15 | 73 |
regional part of nervous system | 6.37e-15 | 54 |
nervous system | 1.95e-14 | 75 |
neural tube | 8.07e-14 | 52 |
neural rod | 8.07e-14 | 52 |
future spinal cord | 8.07e-14 | 52 |
neural keel | 8.07e-14 | 52 |
ectoderm-derived structure | 1.08e-13 | 95 |
ectoderm | 1.08e-13 | 95 |
presumptive ectoderm | 1.08e-13 | 95 |
gray matter | 8.07e-13 | 34 |
brain | 4.91e-12 | 47 |
future brain | 4.91e-12 | 47 |
regional part of brain | 1.87e-11 | 46 |
brain grey matter | 4.86e-11 | 29 |
regional part of telencephalon | 4.86e-11 | 29 |
telencephalon | 4.86e-11 | 29 |
ecto-epithelium | 2.64e-10 | 73 |
neurectoderm | 8.34e-10 | 64 |
neural plate | 8.34e-10 | 64 |
presumptive neural plate | 8.34e-10 | 64 |
anterior neural tube | 1.67e-09 | 40 |
regional part of forebrain | 5.58e-09 | 39 |
forebrain | 5.58e-09 | 39 |
future forebrain | 5.58e-09 | 39 |
cerebral cortex | 2.69e-08 | 21 |
cerebral hemisphere | 2.69e-08 | 21 |
pallium | 2.69e-08 | 21 |
adult organism | 2.71e-08 | 51 |
regional part of cerebral cortex | 8.84e-08 | 17 |
occipital lobe | 1.19e-07 | 10 |
visual cortex | 1.19e-07 | 10 |
neocortex | 1.19e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.