FFCP PHASE1:Mm9::chr5:144519162..144519232,+: Difference between revisions
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|id=chr5:144519162..144519232,+ | |id=chr5:144519162..144519232,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.82e-12!33;CL:0000047!2.82e-12!33;CL:0000031!2.82e-12!33;CL:0000404!2.82e-12!33;CL:0000117!7.05e-12!23;CL:0000337!7.05e-12!23;CL:0000221!6.15e-11!44;CL:0000133!6.15e-11!44;CL:0002319!8.86e-11!43;CL:0000393!9.55e-09!39;CL:0000211!9.55e-09!39;CL:0000055!1.25e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.82e-12!33;CL:0000047!2.82e-12!33;CL:0000031!2.82e-12!33;CL:0000404!2.82e-12!33;CL:0000117!7.05e-12!23;CL:0000337!7.05e-12!23;CL:0000221!6.15e-11!44;CL:0000133!6.15e-11!44;CL:0002319!8.86e-11!43;CL:0000393!9.55e-09!39;CL:0000211!9.55e-09!39;CL:0000055!1.25e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.58e-12,33;CL:0000047,2.58e-12,33;CL:0000031,2.58e-12,33;CL:0000404,2.58e-12,33;CL:0000117,6.47e-12,23;CL:0000337,6.47e-12,23;CL:0000221,5.68e-11,44;CL:0000133,5.68e-11,44;CL:0002319,8.21e-11,43;CL:0000393,8.99e-09,39;CL:0000211,8.99e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.64e-29!73;UBERON:0005743!5.64e-29!73;UBERON:0000073!4.30e-28!75;UBERON:0001016!4.30e-28!75;UBERON:0000033!1.66e-27!63;UBERON:0002346!1.23e-26!71;UBERON:0003075!1.23e-26!71;UBERON:0007284!1.23e-26!71;UBERON:0004121!1.39e-26!102;UBERON:0000924!1.39e-26!102;UBERON:0006601!1.39e-26!102;UBERON:0001049!2.66e-24!52;UBERON:0005068!2.66e-24!52;UBERON:0006241!2.66e-24!52;UBERON:0007135!2.66e-24!52;UBERON:0000955!3.20e-23!50;UBERON:0006238!3.20e-23!50;UBERON:0002616!1.28e-22!49;UBERON:0003056!7.15e-22!49;UBERON:0003080!1.19e-18!40;UBERON:0002780!6.09e-18!39;UBERON:0001890!6.09e-18!39;UBERON:0006240!6.09e-18!39;UBERON:0002020!4.44e-16!34;UBERON:0000153!1.73e-15!94;UBERON:0007811!1.52e-14!86;UBERON:0002791!1.72e-13!29;UBERON:0003528!1.72e-13!29;UBERON:0001893!1.72e-13!29;UBERON:0000956!2.31e-09!21;UBERON:0001869!2.31e-09!21;UBERON:0000203!2.31e-09!21;UBERON:0002619!3.92e-08!17;UBERON:0004111!7.68e-08!122;UBERON:0000025!5.95e-07!114 | |ontology_enrichment_uberon=UBERON:0001017!5.64e-29!73;UBERON:0005743!5.64e-29!73;UBERON:0000073!4.30e-28!75;UBERON:0001016!4.30e-28!75;UBERON:0000033!1.66e-27!63;UBERON:0002346!1.23e-26!71;UBERON:0003075!1.23e-26!71;UBERON:0007284!1.23e-26!71;UBERON:0004121!1.39e-26!102;UBERON:0000924!1.39e-26!102;UBERON:0006601!1.39e-26!102;UBERON:0001049!2.66e-24!52;UBERON:0005068!2.66e-24!52;UBERON:0006241!2.66e-24!52;UBERON:0007135!2.66e-24!52;UBERON:0000955!3.20e-23!50;UBERON:0006238!3.20e-23!50;UBERON:0002616!1.28e-22!49;UBERON:0003056!7.15e-22!49;UBERON:0003080!1.19e-18!40;UBERON:0002780!6.09e-18!39;UBERON:0001890!6.09e-18!39;UBERON:0006240!6.09e-18!39;UBERON:0002020!4.44e-16!34;UBERON:0000153!1.73e-15!94;UBERON:0007811!1.52e-14!86;UBERON:0002791!1.72e-13!29;UBERON:0003528!1.72e-13!29;UBERON:0001893!1.72e-13!29;UBERON:0000956!2.31e-09!21;UBERON:0001869!2.31e-09!21;UBERON:0000203!2.31e-09!21;UBERON:0002619!3.92e-08!17;UBERON:0004111!7.68e-08!122;UBERON:0000025!5.95e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.48e-29,73;UBERON:0001016,3.44e-28,75;UBERON:0002346,8.30e-28,64;UBERON:0003075,8.30e-28,64;UBERON:0007284,8.30e-28,64;UBERON:0004121,7.85e-27,95;UBERON:0000924,7.85e-27,95;UBERON:0006601,7.85e-27,95;UBERON:0000073,1.45e-25,54;UBERON:0001049,2.20e-24,52;UBERON:0005068,2.20e-24,52;UBERON:0006241,2.20e-24,52;UBERON:0007135,2.20e-24,52;UBERON:0010371,7.77e-23,73;UBERON:0003056,6.03e-22,49;UBERON:0000955,2.09e-21,47;UBERON:0006238,2.09e-21,47;UBERON:0010314,2.15e-21,92;UBERON:0002616,8.18e-21,46;UBERON:0003080,1.03e-18,40;UBERON:0002780,5.31e-18,39;UBERON:0001890,5.31e-18,39;UBERON:0006240,5.31e-18,39;UBERON:0002020,3.94e-16,34;UBERON:0003528,1.56e-13,29;UBERON:0002791,1.56e-13,29;UBERON:0001893,1.56e-13,29;UBERON:0000956,2.16e-09,21;UBERON:0001869,2.16e-09,21;UBERON:0000203,2.16e-09,21;UBERON:0002619,3.71e-08,17;UBERON:0004111,1.14e-07,122;UBERON:0000025,8.68e-07,114 | |||
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|short_description=p1@D130017N08Rik | |short_description=p1@D130017N08Rik | ||
}} | }} |
Revision as of 00:57, 14 November 2012
Short description: | p1@D130017N08Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D130017N08Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2802 |
Association with transcript: | 0bp_to_ENSMUST00000146005, NR_015486, uc009akq.2_5end |
EntrezGene: | D130017N08Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.58e-12 | 33 |
neuronal stem cell | 2.58e-12 | 33 |
neuroblast | 2.58e-12 | 33 |
electrically signaling cell | 2.58e-12 | 33 |
CNS neuron (sensu Vertebrata) | 6.47e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.47e-12 | 23 |
ectodermal cell | 5.68e-11 | 44 |
neurectodermal cell | 5.68e-11 | 44 |
neural cell | 8.21e-11 | 43 |
electrically responsive cell | 8.99e-09 | 39 |
electrically active cell | 8.99e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.48e-29 | 73 |
nervous system | 3.44e-28 | 75 |
neurectoderm | 8.30e-28 | 64 |
neural plate | 8.30e-28 | 64 |
presumptive neural plate | 8.30e-28 | 64 |
ectoderm-derived structure | 7.85e-27 | 95 |
ectoderm | 7.85e-27 | 95 |
presumptive ectoderm | 7.85e-27 | 95 |
regional part of nervous system | 1.45e-25 | 54 |
neural tube | 2.20e-24 | 52 |
neural rod | 2.20e-24 | 52 |
future spinal cord | 2.20e-24 | 52 |
neural keel | 2.20e-24 | 52 |
ecto-epithelium | 7.77e-23 | 73 |
pre-chordal neural plate | 6.03e-22 | 49 |
brain | 2.09e-21 | 47 |
future brain | 2.09e-21 | 47 |
structure with developmental contribution from neural crest | 2.15e-21 | 92 |
regional part of brain | 8.18e-21 | 46 |
anterior neural tube | 1.03e-18 | 40 |
regional part of forebrain | 5.31e-18 | 39 |
forebrain | 5.31e-18 | 39 |
future forebrain | 5.31e-18 | 39 |
gray matter | 3.94e-16 | 34 |
brain grey matter | 1.56e-13 | 29 |
regional part of telencephalon | 1.56e-13 | 29 |
telencephalon | 1.56e-13 | 29 |
cerebral cortex | 2.16e-09 | 21 |
cerebral hemisphere | 2.16e-09 | 21 |
pallium | 2.16e-09 | 21 |
regional part of cerebral cortex | 3.71e-08 | 17 |
anatomical conduit | 1.14e-07 | 122 |
tube | 8.68e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.