FFCP PHASE1:Mm9::chr2:151906634..151906642,+: Difference between revisions
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|id=chr2:151906634..151906642,+ | |id=chr2:151906634..151906642,+ | ||
|ontology_enrichment_celltype=CL:0000117!8.39e-13!23;CL:0000337!8.39e-13!23;CL:0002609!4.35e-12!6;CL:0000540!8.69e-08!33;CL:0000047!8.69e-08!33;CL:0000031!8.69e-08!33;CL:0000404!8.69e-08!33;CL:0002608!9.47e-07!3 | |ontology_enrichment_celltype=CL:0000117!8.39e-13!23;CL:0000337!8.39e-13!23;CL:0002609!4.35e-12!6;CL:0000540!8.69e-08!33;CL:0000047!8.69e-08!33;CL:0000031!8.69e-08!33;CL:0000404!8.69e-08!33;CL:0002608!9.47e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.05e-65,6;CL:0002608,4.64e-33,3;CL:0000117,2.59e-30,23;CL:0000337,2.59e-30,23;CL:0000540,3.59e-21,33;CL:0000047,3.59e-21,33;CL:0000031,3.59e-21,33;CL:0000404,3.59e-21,33;CL:0000393,6.32e-18,39;CL:0000211,6.32e-18,39;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0002321,5.63e-10,70;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.11e-13!49;UBERON:0000033!7.09e-12!63;UBERON:0002346!7.14e-09!71;UBERON:0003075!7.14e-09!71;UBERON:0007284!7.14e-09!71;UBERON:0000369!8.21e-09!5;UBERON:0002435!8.21e-09!5;UBERON:0000204!8.21e-09!5;UBERON:0010082!8.21e-09!5;UBERON:0000970!3.70e-08!9;UBERON:0000019!3.70e-08!9;UBERON:0000047!3.70e-08!9;UBERON:0004088!3.70e-08!9;UBERON:0002104!3.70e-08!9;UBERON:0001456!3.70e-08!9;UBERON:0003072!3.70e-08!9;UBERON:0003071!3.70e-08!9;UBERON:0004128!3.70e-08!9;UBERON:0002791!5.07e-08!29;UBERON:0003528!5.07e-08!29;UBERON:0001893!5.07e-08!29;UBERON:0000955!6.89e-08!50;UBERON:0006238!6.89e-08!50;UBERON:0004121!1.03e-07!102;UBERON:0000924!1.03e-07!102;UBERON:0006601!1.03e-07!102;UBERON:0003080!1.27e-07!40;UBERON:0002020!1.61e-07!34;UBERON:0002616!4.67e-07!49;UBERON:0002780!5.55e-07!39;UBERON:0001890!5.55e-07!39;UBERON:0006240!5.55e-07!39;UBERON:0001017!6.26e-07!73;UBERON:0005743!6.26e-07!73;UBERON:0007811!6.50e-07!86 | |ontology_enrichment_uberon=UBERON:0003056!4.11e-13!49;UBERON:0000033!7.09e-12!63;UBERON:0002346!7.14e-09!71;UBERON:0003075!7.14e-09!71;UBERON:0007284!7.14e-09!71;UBERON:0000369!8.21e-09!5;UBERON:0002435!8.21e-09!5;UBERON:0000204!8.21e-09!5;UBERON:0010082!8.21e-09!5;UBERON:0000970!3.70e-08!9;UBERON:0000019!3.70e-08!9;UBERON:0000047!3.70e-08!9;UBERON:0004088!3.70e-08!9;UBERON:0002104!3.70e-08!9;UBERON:0001456!3.70e-08!9;UBERON:0003072!3.70e-08!9;UBERON:0003071!3.70e-08!9;UBERON:0004128!3.70e-08!9;UBERON:0002791!5.07e-08!29;UBERON:0003528!5.07e-08!29;UBERON:0001893!5.07e-08!29;UBERON:0000955!6.89e-08!50;UBERON:0006238!6.89e-08!50;UBERON:0004121!1.03e-07!102;UBERON:0000924!1.03e-07!102;UBERON:0006601!1.03e-07!102;UBERON:0003080!1.27e-07!40;UBERON:0002020!1.61e-07!34;UBERON:0002616!4.67e-07!49;UBERON:0002780!5.55e-07!39;UBERON:0001890!5.55e-07!39;UBERON:0006240!5.55e-07!39;UBERON:0001017!6.26e-07!73;UBERON:0005743!6.26e-07!73;UBERON:0007811!6.50e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.39e-19,21;UBERON:0001869,5.39e-19,21;UBERON:0000203,5.39e-19,21;UBERON:0003528,1.59e-18,29;UBERON:0002791,1.59e-18,29;UBERON:0001893,1.59e-18,29;UBERON:0002020,8.22e-16,34;UBERON:0001954,1.23e-14,7;UBERON:0003022,1.23e-14,7;UBERON:0002421,1.23e-14,7;UBERON:0000349,1.23e-14,7;UBERON:0002600,1.23e-14,7;UBERON:0002780,8.64e-14,39;UBERON:0001890,8.64e-14,39;UBERON:0006240,8.64e-14,39;UBERON:0003080,1.91e-13,40;UBERON:0002616,1.08e-11,46;UBERON:0000955,1.92e-11,47;UBERON:0006238,1.92e-11,47;UBERON:0003056,5.65e-11,49;UBERON:0001049,2.44e-10,52;UBERON:0005068,2.44e-10,52;UBERON:0006241,2.44e-10,52;UBERON:0007135,2.44e-10,52;UBERON:0000073,5.93e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.20e-08,64;UBERON:0003075,2.20e-08,64;UBERON:0007284,2.20e-08,64;UBERON:0010371,2.46e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,5.70292867696627,6.34527910158946,3.99617426567626,0,0,3.1847607795888,3.73797336971122,1.83843757322004,0,0,0.153606533256243,0.527545150920775,0.274462930807229,1.04182674111352,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.753926112677186,0,0,0,0.486723789203273,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.612328492361951,0.768682321709099,0.843315521037559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.824171801606613,0,0.342869252385415,0,0.238436189947321,0,0.470546902076653,0,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0,0.999242311751784,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0,5.70292867696627,6.34527910158946,3.99617426567626,0,0,3.1847607795888,3.73797336971122,1.83843757322004,0,0,0.153606533256243,0.527545150920775,0.274462930807229,1.04182674111352,0,0,0,0,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.753926112677186,0,0,0,0.486723789203273,0,0,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.612328492361951,0.768682321709099,0.843315521037559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0,0.824171801606613,0,0.342869252385415,0,0.238436189947321,0,0.470546902076653,0,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0.818462086339379,0.154936841185966,0,0.999242311751784,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr2:151906634..151906642,+ | |short_description=p@chr2:151906634..151906642,+ | ||
}} | }} |
Revision as of 02:13, 14 November 2012
Short description: | p@chr2:151906634..151906642, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:151906634..151906642, + |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.05e-65 | 6 |
hippocampal neuron | 4.64e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.59e-30 | 23 |
neuroblast (sensu Vertebrata) | 2.59e-30 | 23 |
neuron | 3.59e-21 | 33 |
neuronal stem cell | 3.59e-21 | 33 |
neuroblast | 3.59e-21 | 33 |
electrically signaling cell | 3.59e-21 | 33 |
electrically responsive cell | 6.32e-18 | 39 |
electrically active cell | 6.32e-18 | 39 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
embryonic cell | 5.63e-10 | 70 |
somatic stem cell | 1.22e-07 | 91 |
multi fate stem cell | 1.22e-07 | 91 |
stem cell | 3.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.39e-19 | 21 |
cerebral hemisphere | 5.39e-19 | 21 |
pallium | 5.39e-19 | 21 |
brain grey matter | 1.59e-18 | 29 |
regional part of telencephalon | 1.59e-18 | 29 |
telencephalon | 1.59e-18 | 29 |
gray matter | 8.22e-16 | 34 |
Ammon's horn | 1.23e-14 | 7 |
lobe parts of cerebral cortex | 1.23e-14 | 7 |
hippocampal formation | 1.23e-14 | 7 |
limbic system | 1.23e-14 | 7 |
limbic lobe | 1.23e-14 | 7 |
regional part of forebrain | 8.64e-14 | 39 |
forebrain | 8.64e-14 | 39 |
future forebrain | 8.64e-14 | 39 |
anterior neural tube | 1.91e-13 | 40 |
regional part of brain | 1.08e-11 | 46 |
brain | 1.92e-11 | 47 |
future brain | 1.92e-11 | 47 |
pre-chordal neural plate | 5.65e-11 | 49 |
neural tube | 2.44e-10 | 52 |
neural rod | 2.44e-10 | 52 |
future spinal cord | 2.44e-10 | 52 |
neural keel | 2.44e-10 | 52 |
regional part of nervous system | 5.93e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.20e-08 | 64 |
neural plate | 2.20e-08 | 64 |
presumptive neural plate | 2.20e-08 | 64 |
ecto-epithelium | 2.46e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.