FFCP PHASE1:Mm9::chr13:30473208..30473233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:30473208..30473233,+ | |id=chr13:30473208..30473233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.01e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.16e-19!49;UBERON:0005173!4.16e-19!49;UBERON:0002417!4.16e-19!49;UBERON:0000916!4.16e-19!49;UBERON:0009569!1.97e-18!66;UBERON:0005177!4.21e-14!85;UBERON:0005256!2.64e-12!47;UBERON:0002100!2.71e-11!98;UBERON:0002107!3.53e-11!22;UBERON:0007499!3.53e-11!22;UBERON:0006925!3.53e-11!22;UBERON:0009497!3.53e-11!22;UBERON:0000015!3.53e-11!22;UBERON:0002423!3.53e-11!22;UBERON:0006235!3.53e-11!22;UBERON:0008835!3.53e-11!22;UBERON:0003894!3.53e-11!22;UBERON:0004161!3.53e-11!22;UBERON:0008836!3.53e-11!22;UBERON:0002365!1.56e-10!25;UBERON:0002330!1.56e-10!25;UBERON:0009854!1.82e-10!23;UBERON:0009856!1.82e-10!23;UBERON:0002530!3.68e-09!65;UBERON:0002369!3.99e-09!7;UBERON:0006858!3.99e-09!7;UBERON:0002368!8.77e-09!60;UBERON:0003914!1.13e-08!47;UBERON:0000926!1.23e-08!193;UBERON:0004120!1.23e-08!193;UBERON:0006603!1.23e-08!193;UBERON:0003104!3.43e-08!131;UBERON:0009142!3.43e-08!131;UBERON:0000466!2.13e-07!79;UBERON:0000949!2.65e-07!72;UBERON:0003064!3.54e-07!14 | |ontology_enrichment_uberon=UBERON:0005172!4.16e-19!49;UBERON:0005173!4.16e-19!49;UBERON:0002417!4.16e-19!49;UBERON:0000916!4.16e-19!49;UBERON:0009569!1.97e-18!66;UBERON:0005177!4.21e-14!85;UBERON:0005256!2.64e-12!47;UBERON:0002100!2.71e-11!98;UBERON:0002107!3.53e-11!22;UBERON:0007499!3.53e-11!22;UBERON:0006925!3.53e-11!22;UBERON:0009497!3.53e-11!22;UBERON:0000015!3.53e-11!22;UBERON:0002423!3.53e-11!22;UBERON:0006235!3.53e-11!22;UBERON:0008835!3.53e-11!22;UBERON:0003894!3.53e-11!22;UBERON:0004161!3.53e-11!22;UBERON:0008836!3.53e-11!22;UBERON:0002365!1.56e-10!25;UBERON:0002330!1.56e-10!25;UBERON:0009854!1.82e-10!23;UBERON:0009856!1.82e-10!23;UBERON:0002530!3.68e-09!65;UBERON:0002369!3.99e-09!7;UBERON:0006858!3.99e-09!7;UBERON:0002368!8.77e-09!60;UBERON:0003914!1.13e-08!47;UBERON:0000926!1.23e-08!193;UBERON:0004120!1.23e-08!193;UBERON:0006603!1.23e-08!193;UBERON:0003104!3.43e-08!131;UBERON:0009142!3.43e-08!131;UBERON:0000466!2.13e-07!79;UBERON:0000949!2.65e-07!72;UBERON:0003064!3.54e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.66e-17,45;UBERON:0005172,1.04e-15,49;UBERON:0005173,1.04e-15,49;UBERON:0002417,1.04e-15,49;UBERON:0000916,1.04e-15,49;UBERON:0002107,4.18e-13,22;UBERON:0007499,4.18e-13,22;UBERON:0006925,4.18e-13,22;UBERON:0009497,4.18e-13,22;UBERON:0000015,4.18e-13,22;UBERON:0002423,4.18e-13,22;UBERON:0006235,4.18e-13,22;UBERON:0008835,4.18e-13,22;UBERON:0003894,4.18e-13,22;UBERON:0004161,4.18e-13,22;UBERON:0008836,4.18e-13,22;UBERON:0009854,1.57e-12,23;UBERON:0009856,1.57e-12,23;UBERON:0003104,1.73e-12,61;UBERON:0009142,1.73e-12,61;UBERON:0002530,1.13e-11,65;UBERON:0002365,1.63e-11,25;UBERON:0002330,1.63e-11,25;UBERON:0009569,1.74e-11,66;UBERON:0002369,6.29e-11,7;UBERON:0006858,6.29e-11,7;UBERON:0002368,2.75e-10,60;UBERON:0005177,1.80e-09,79;UBERON:0003064,2.27e-09,14;UBERON:0000998,6.33e-09,1;UBERON:0007194,6.33e-09,1;UBERON:0006868,6.33e-09,1;UBERON:0000949,1.87e-08,72;UBERON:0002100,3.24e-08,90 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,1.07940638327563,1.29955283489534,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,2.82040064223167,0.346970653532272,0.913396434936424,1.84492397804847,0.753613202763113,1.99900802130698,0.753999547978053,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.701358198903186,0.505892296994058,0,0.156998727841375,0.987177311374404,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0,8.59316701907687,0.274561413188081,2.87536413054709,5.20997326735905,0.936113019343682,0.505157755894224,0.179397413521912,2.8946611281802,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.546776910884101,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,1.3390183244819,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,1.07940638327563,1.29955283489534,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,2.82040064223167,0.346970653532272,0.913396434936424,1.84492397804847,0.753613202763113,1.99900802130698,0.753999547978053,0.247194967734374,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0,0,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.701358198903186,0.505892296994058,0,0.156998727841375,0.987177311374404,0.592905254174298,0,0,0,0,0.241177159752417,0.25462585178142,0,8.59316701907687,0.274561413188081,2.87536413054709,5.20997326735905,0.936113019343682,0.505157755894224,0.179397413521912,2.8946611281802,0,0,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.807322133479528,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.546776910884101,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,1.3390183244819,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr13:30473208..30473233,+ | |short_description=p@chr13:30473208..30473233,+ | ||
}} | }} |
Revision as of 08:20, 14 November 2012
Short description: | p@chr13:30473208..30473233, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30473208..30473233, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.01e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.66e-17 | 45 |
abdomen element | 1.04e-15 | 49 |
abdominal segment element | 1.04e-15 | 49 |
abdominal segment of trunk | 1.04e-15 | 49 |
abdomen | 1.04e-15 | 49 |
liver | 4.18e-13 | 22 |
epithelial sac | 4.18e-13 | 22 |
digestive gland | 4.18e-13 | 22 |
epithelium of foregut-midgut junction | 4.18e-13 | 22 |
anatomical boundary | 4.18e-13 | 22 |
hepatobiliary system | 4.18e-13 | 22 |
foregut-midgut junction | 4.18e-13 | 22 |
hepatic diverticulum | 4.18e-13 | 22 |
liver primordium | 4.18e-13 | 22 |
septum transversum | 4.18e-13 | 22 |
liver bud | 4.18e-13 | 22 |
digestive tract diverticulum | 1.57e-12 | 23 |
sac | 1.57e-12 | 23 |
mesenchyme | 1.73e-12 | 61 |
entire embryonic mesenchyme | 1.73e-12 | 61 |
gland | 1.13e-11 | 65 |
exocrine gland | 1.63e-11 | 25 |
exocrine system | 1.63e-11 | 25 |
subdivision of trunk | 1.74e-11 | 66 |
adrenal gland | 6.29e-11 | 7 |
adrenal/interrenal gland | 6.29e-11 | 7 |
endocrine gland | 2.75e-10 | 60 |
trunk region element | 1.80e-09 | 79 |
intermediate mesoderm | 2.27e-09 | 14 |
seminal vesicle | 6.33e-09 | 1 |
vesicular gland | 6.33e-09 | 1 |
seminal fluid secreting gland | 6.33e-09 | 1 |
endocrine system | 1.87e-08 | 72 |
trunk | 3.24e-08 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.