FFCP PHASE1:Mm9::chr7:133940945..133940949,-: Difference between revisions
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|id=chr7:133940945..133940949,- | |id=chr7:133940945..133940949,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,3.94e-11,3;CL:0002540,3.94e-11,3;CL:0002614,1.73e-10,3;CL:0002453,3.65e-09,8;CL:0000333,2.79e-07,10;CL:0000095,2.79e-07,10;CL:0000243,2.79e-07,10;CL:0000123,2.79e-07,10;CL:0000125,2.79e-07,10;CL:0000030,2.79e-07,10;CL:0000339,2.79e-07,10;CL:0000878,8.62e-07,2;CL:0000129,8.62e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.73e-10,3;UBERON:0009663,1.73e-10,3;UBERON:0009661,1.73e-10,3;UBERON:0000125,1.73e-10,3;UBERON:0002308,1.73e-10,3;UBERON:0002950,5.78e-08,4;UBERON:0001891,5.78e-08,4;UBERON:0009616,5.78e-08,4;UBERON:0010286,5.78e-08,4;UBERON:0001017,1.26e-07,73;UBERON:0001016,2.45e-07,75;UBERON:0002204,8.99e-07,32 | |||
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| ||
|short_description=p12@Aldoa,p13@Aldoart1 | |short_description=p12@Aldoa,p13@Aldoart1 | ||
}} | }} |
Revision as of 13:56, 14 November 2012
Short description: | p12@Aldoa, p13@Aldoart1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Aldoa_5end, CAGE_peak_13_at_Aldoart1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3597 |
Association with transcript: | 315bp_to_ENSMUST00000143509_5end |
EntrezGene: | 11674,353204 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 3.94e-11 | 3 |
mesenchymal stem cell of the bone marrow | 3.94e-11 | 3 |
neuron of the substantia nigra | 1.73e-10 | 3 |
oligodendrocyte precursor cell | 3.65e-09 | 8 |
migratory neural crest cell | 2.79e-07 | 10 |
neuron associated cell | 2.79e-07 | 10 |
glial cell (sensu Vertebrata) | 2.79e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.79e-07 | 10 |
glial cell | 2.79e-07 | 10 |
glioblast | 2.79e-07 | 10 |
glioblast (sensu Vertebrata) | 2.79e-07 | 10 |
central nervous system macrophage | 8.62e-07 | 2 |
microglial cell | 8.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.73e-10 | 3 |
telencephalic nucleus | 1.73e-10 | 3 |
midbrain nucleus | 1.73e-10 | 3 |
neural nucleus | 1.73e-10 | 3 |
nucleus of brain | 1.73e-10 | 3 |
regional part of midbrain | 5.78e-08 | 4 |
midbrain | 5.78e-08 | 4 |
presumptive midbrain | 5.78e-08 | 4 |
midbrain neural tube | 5.78e-08 | 4 |
central nervous system | 1.26e-07 | 73 |
nervous system | 2.45e-07 | 75 |
musculoskeletal system | 8.99e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.