FFCP PHASE1:Mm9::chr11:51912317..51912344,+: Difference between revisions
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|id=chr11:51912317..51912344,+ | |id=chr11:51912317..51912344,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.43e-16!121;CL:0000012!1.43e-16!121;CL:0002371!1.99e-15!118;CL:0002321!1.08e-14!70;CL:0000220!1.08e-14!70;CL:0000548!2.34e-14!115;CL:0000004!2.34e-14!115;CL:0000255!2.34e-14!115;CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0002319!2.11e-11!43;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0000034!2.43e-09!97;CL:0000055!3.97e-09!50;CL:0000393!5.99e-09!39;CL:0000211!5.99e-09!39;CL:0000723!1.89e-07!91;CL:0000048!1.89e-07!91;CL:0000066!2.70e-07!25;CL:0002076!6.74e-07!15 | |ontology_enrichment_celltype=CL:0000144!1.43e-16!121;CL:0000012!1.43e-16!121;CL:0002371!1.99e-15!118;CL:0002321!1.08e-14!70;CL:0000220!1.08e-14!70;CL:0000548!2.34e-14!115;CL:0000004!2.34e-14!115;CL:0000255!2.34e-14!115;CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0002319!2.11e-11!43;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0000034!2.43e-09!97;CL:0000055!3.97e-09!50;CL:0000393!5.99e-09!39;CL:0000211!5.99e-09!39;CL:0000723!1.89e-07!91;CL:0000048!1.89e-07!91;CL:0000066!2.70e-07!25;CL:0002076!6.74e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.08e-14,70;CL:0000117,1.43e-13,23;CL:0000337,1.43e-13,23;CL:0000540,7.02e-12,33;CL:0000047,7.02e-12,33;CL:0000031,7.02e-12,33;CL:0000404,7.02e-12,33;CL:0002319,2.11e-11,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0000034,2.43e-09,97;CL:0000393,5.99e-09,39;CL:0000211,5.99e-09,39;CL:0000723,1.89e-07,91;CL:0000048,1.89e-07,91;CL:0000066,2.70e-07,25;CL:0002076,6.74e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.15e-18!75;UBERON:0001016!3.15e-18!75;UBERON:0001017!7.64e-18!73;UBERON:0005743!7.64e-18!73;UBERON:0002020!1.27e-17!34;UBERON:0001049!5.85e-15!52;UBERON:0005068!5.85e-15!52;UBERON:0006241!5.85e-15!52;UBERON:0007135!5.85e-15!52;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0000955!1.86e-13!50;UBERON:0006238!1.86e-13!50;UBERON:0002616!4.37e-13!49;UBERON:0000064!1.85e-12!99;UBERON:0003080!5.99e-11!40;UBERON:0000956!8.07e-11!21;UBERON:0001869!8.07e-11!21;UBERON:0000203!8.07e-11!21;UBERON:0002780!1.03e-10!39;UBERON:0001890!1.03e-10!39;UBERON:0006240!1.03e-10!39;UBERON:0007811!2.51e-10!86;UBERON:0004121!6.44e-10!102;UBERON:0000924!6.44e-10!102;UBERON:0006601!6.44e-10!102;UBERON:0000033!1.01e-09!63;UBERON:0002346!1.17e-09!71;UBERON:0003075!1.17e-09!71;UBERON:0007284!1.17e-09!71;UBERON:0000153!2.19e-09!94;UBERON:0002619!3.02e-09!17;UBERON:0003056!2.97e-08!49;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!3.15e-18!75;UBERON:0001016!3.15e-18!75;UBERON:0001017!7.64e-18!73;UBERON:0005743!7.64e-18!73;UBERON:0002020!1.27e-17!34;UBERON:0001049!5.85e-15!52;UBERON:0005068!5.85e-15!52;UBERON:0006241!5.85e-15!52;UBERON:0007135!5.85e-15!52;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0000955!1.86e-13!50;UBERON:0006238!1.86e-13!50;UBERON:0002616!4.37e-13!49;UBERON:0000064!1.85e-12!99;UBERON:0003080!5.99e-11!40;UBERON:0000956!8.07e-11!21;UBERON:0001869!8.07e-11!21;UBERON:0000203!8.07e-11!21;UBERON:0002780!1.03e-10!39;UBERON:0001890!1.03e-10!39;UBERON:0006240!1.03e-10!39;UBERON:0007811!2.51e-10!86;UBERON:0004121!6.44e-10!102;UBERON:0000924!6.44e-10!102;UBERON:0006601!6.44e-10!102;UBERON:0000033!1.01e-09!63;UBERON:0002346!1.17e-09!71;UBERON:0003075!1.17e-09!71;UBERON:0007284!1.17e-09!71;UBERON:0000153!2.19e-09!94;UBERON:0002619!3.02e-09!17;UBERON:0003056!2.97e-08!49;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.15e-18,75;UBERON:0001017,7.64e-18,73;UBERON:0002020,1.27e-17,34;UBERON:0000073,3.27e-16,54;UBERON:0001049,5.85e-15,52;UBERON:0005068,5.85e-15,52;UBERON:0006241,5.85e-15,52;UBERON:0007135,5.85e-15,52;UBERON:0003528,3.20e-14,29;UBERON:0002791,3.20e-14,29;UBERON:0001893,3.20e-14,29;UBERON:0002346,3.46e-12,64;UBERON:0003075,3.46e-12,64;UBERON:0007284,3.46e-12,64;UBERON:0000955,5.83e-12,47;UBERON:0006238,5.83e-12,47;UBERON:0004121,6.75e-12,95;UBERON:0000924,6.75e-12,95;UBERON:0006601,6.75e-12,95;UBERON:0002616,1.34e-11,46;UBERON:0003080,5.99e-11,40;UBERON:0000956,8.07e-11,21;UBERON:0001869,8.07e-11,21;UBERON:0000203,8.07e-11,21;UBERON:0002780,1.03e-10,39;UBERON:0001890,1.03e-10,39;UBERON:0006240,1.03e-10,39;UBERON:0002619,3.02e-09,17;UBERON:0010371,3.13e-09,73;UBERON:0003056,2.97e-08,49;UBERON:0010314,6.62e-08,92;UBERON:0002021,3.19e-07,10;UBERON:0000411,3.19e-07,10;UBERON:0001950,3.19e-07,10 | |||
|phase1_expression=123.154463423587,313.030940652507,272.089545154943,375.96301465439,331.592973224482,208.673934986479,232.911802673739,126.411733649303,212.450181726865,183.272524110121,139.542644103787,129.549986208426,128.571748178335,118.104963668065,156.894697815177,174.12872995525,169.293974507011,126.342597225974,121.894731475502,109.91691981569,100.521168958564,122.723615684294,158.287072218195,155.832619800778,149.116032693661,203.852347260832,210.211854125628,211.808221730229,179.572131386273,148.697776558359,160.532889714441,74.9336194682365,86.7241350494244,47.5445043046316,160.312648961957,162.577483160606,167.418872135143,188.757765462345,184.395141307617,185.327405366725,194.116391050235,182.373144483905,178.182299562433,117.209937535262,118.611009526832,95.9949513805595,104.058048798289,177.908527606444,154.878758827803,161.960105928878,174.703054188452,152.37771822687,185.903127511972,189.319519064961,166.36643057552,113.708670727889,118.051777254768,109.322483562818,287.694007342348,266.082462573833,269.378346490126,116.223674499712,104.936785941114,99.8888686182353,83.0647744556259,94.4938552878313,124.633645975656,94.5177031091024,190.166748973748,240.580582107073,220.420559496248,340.781624393738,338.14973619692,223.178236169646,237.984304538281,236.239228158775,240.052620578667,216.302350716308,254.526025605595,265.750869776341,274.096980232819,262.01942539005,238.422281147179,154.759717758712,216.362318851963,322.323672508192,288.302653618183,291.52873327077,150.619398539703,158.775847784356,177.107202596725,150.574178471743,182.232317433677,125.750843651611,111.761543800999,138.888335000174,108.984870022239,102.939914837147,87.5478835511668,86.214856180523,131.829440910973,238.687247990631,343.987073603972,554.632028459598,145.481979559536,144.668483186281,135.986075708977,128.685232443381,88.2978183236856,97.5264853655899,119.010934161569,121.481725846544,116.230210617053,100.381278608047,103.242884865149,108.57593490884,123.844678834921,114.95648875133,102.614824026185,111.942660163607,104.678879750227,93.0960486019627,167.75258509631,161.322219153362,142.842654046776,95.2854815928046,214.588887990103,235.761773280409,188.318076522282,167.615725493997,168.360221837255,194.76424577494,172.781374271123,173.375080069964,200.515462999975,195.013998207445,92.1646242845362,90.941495515978,77.8386095975718,112.79683475515,115.937314679769,133.573122675848,154.8534316326,113.782137465965,110.083055626848,108.512321081268,122.280750550446,94.4267303197407,189.053129802103,132.374256117473,135.658316730405,138.531702894227,97.3165372289593,122.23651044928,105.772018113683,85.3857004651336,218.388301254416,211.282631741181,173.908061630103,166.529121118544,112.572508790926,130.544994559236,138.969159788518,140.489661467646,132.823984196033,137.427561347491,157.208213220177,121.552721404223,124.736366234418,112.947215286418,120.387182175596,119.591589713922,115.702910758384,104.54680021433,176.643556793867,169.072278139164,134.480444674406,130.638579931791,116.028808291167,119.137412664405,128.351991476805,114.354558461435,112.745668229349,96.63461806518,102.498277293615,109.360105936743,80.175931607286,90.9231077228059,98.2618999080366,91.6795796827306,90.7779809473716,106.142298644578,165.58007753204,110.021317643169,120.597277170196,108.546157741552,105.510153019188,87.2489599435563,94.4121499265161,82.0712422766588,90.5882659644733,106.985341120201,87.7499776177961,132.141323727146,121.866576970186,119.851505901127,131.656218781138,106.841481770321,109.489116266011,116.229239530127,103.442274682473,70.5622831893369,90.5739701122334,68.4739343710046,78.0094182786401,81.33039869897,98.8479748505736,83.4627291958625,97.5496844079673,141.360593180782,128.416401436316,119.330795299957,109.60034595073,101.173779494857,113.070729420857,102.054897829629,86.2264238260865,97.8873928247585,95.5134064258348,90.1248230936559,77.3628718759212,83.8964539772767,134.204242705952,104.429891293192,89.9928619624836,94.0944304899138,185.4359314359,192.344377697805,86.393716213508,106.79520220745,137.877091884904,137.824876736713,146.918757253769,131.910776469809,131.22841903453,165.316693980678,113.751807170645,137.944764934139,154.557521177091,189.900898005288,92.9707558114159,97.0457539986541,93.3342277095991,85.4545236997734,69.0274719367807,118.476950443631,82.8366546083418,81.6659995343039,87.7046621855895,101.146163673552,81.1464840548214,67.617273682816,73.0819625688679,77.7450424522107,84.334886859999,91.7906334908863,78.9819885348788,135.045820523483,137.508280861068,118.528380372471,124.138163549591,117.901788434969,103.007686896928,98.3421785640156,122.263959901193,111.211837203506,105.633102668327,123.499803453169,118.191960341403,104.522298900494,109.106322418867,104.229471338114,90.3590593552537,179.677117648184,107.136042260254,102.780660245685,107.042436819693,101.530598325528,98.8299266423012,97.9170581323917,200.234590532762,175.918975570838,192.097963588149,126.016521577995,145.830893040903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| ||
|short_description=p1@Ppp2ca | |short_description=p1@Ppp2ca | ||
}} | }} |
Revision as of 17:18, 14 November 2012
Short description: | p1@Ppp2ca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp2ca_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_019411, uc007ivb.1_5end |
EntrezGene: | Ppp2ca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.08e-14 | 70 |
CNS neuron (sensu Vertebrata) | 1.43e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-13 | 23 |
neuron | 7.02e-12 | 33 |
neuronal stem cell | 7.02e-12 | 33 |
neuroblast | 7.02e-12 | 33 |
electrically signaling cell | 7.02e-12 | 33 |
neural cell | 2.11e-11 | 43 |
ectodermal cell | 2.75e-11 | 44 |
neurectodermal cell | 2.75e-11 | 44 |
stem cell | 2.43e-09 | 97 |
electrically responsive cell | 5.99e-09 | 39 |
electrically active cell | 5.99e-09 | 39 |
somatic stem cell | 1.89e-07 | 91 |
multi fate stem cell | 1.89e-07 | 91 |
epithelial cell | 2.70e-07 | 25 |
endo-epithelial cell | 6.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.15e-18 | 75 |
central nervous system | 7.64e-18 | 73 |
gray matter | 1.27e-17 | 34 |
regional part of nervous system | 3.27e-16 | 54 |
neural tube | 5.85e-15 | 52 |
neural rod | 5.85e-15 | 52 |
future spinal cord | 5.85e-15 | 52 |
neural keel | 5.85e-15 | 52 |
brain grey matter | 3.20e-14 | 29 |
regional part of telencephalon | 3.20e-14 | 29 |
telencephalon | 3.20e-14 | 29 |
neurectoderm | 3.46e-12 | 64 |
neural plate | 3.46e-12 | 64 |
presumptive neural plate | 3.46e-12 | 64 |
brain | 5.83e-12 | 47 |
future brain | 5.83e-12 | 47 |
ectoderm-derived structure | 6.75e-12 | 95 |
ectoderm | 6.75e-12 | 95 |
presumptive ectoderm | 6.75e-12 | 95 |
regional part of brain | 1.34e-11 | 46 |
anterior neural tube | 5.99e-11 | 40 |
cerebral cortex | 8.07e-11 | 21 |
cerebral hemisphere | 8.07e-11 | 21 |
pallium | 8.07e-11 | 21 |
regional part of forebrain | 1.03e-10 | 39 |
forebrain | 1.03e-10 | 39 |
future forebrain | 1.03e-10 | 39 |
regional part of cerebral cortex | 3.02e-09 | 17 |
ecto-epithelium | 3.13e-09 | 73 |
pre-chordal neural plate | 2.97e-08 | 49 |
structure with developmental contribution from neural crest | 6.62e-08 | 92 |
occipital lobe | 3.19e-07 | 10 |
visual cortex | 3.19e-07 | 10 |
neocortex | 3.19e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.