FFCP PHASE1:Mm9::chr5:90953839..90953865,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr5:90953839..90953865,+ | |id=chr5:90953839..90953865,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.49e-07!5;CL:0000417!9.49e-07!5;CL:0000668!9.49e-07!5;CL:0000412!9.49e-07!5;CL:0000182!9.49e-07!5 | |ontology_enrichment_celltype=CL:0000181!9.49e-07!5;CL:0000417!9.49e-07!5;CL:0000668!9.49e-07!5;CL:0000412!9.49e-07!5;CL:0000182!9.49e-07!5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.01e-16,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.56e-22!22;UBERON:0007499!5.56e-22!22;UBERON:0006925!5.56e-22!22;UBERON:0009497!5.56e-22!22;UBERON:0000015!5.56e-22!22;UBERON:0002423!5.56e-22!22;UBERON:0006235!5.56e-22!22;UBERON:0008835!5.56e-22!22;UBERON:0003894!5.56e-22!22;UBERON:0004161!5.56e-22!22;UBERON:0008836!5.56e-22!22;UBERON:0009854!8.41e-21!23;UBERON:0009856!8.41e-21!23;UBERON:0005172!4.38e-19!49;UBERON:0005173!4.38e-19!49;UBERON:0002417!4.38e-19!49;UBERON:0000916!4.38e-19!49;UBERON:0002365!9.97e-19!25;UBERON:0002330!9.97e-19!25;UBERON:0009569!2.85e-12!66;UBERON:0005177!1.13e-09!85;UBERON:0005256!9.97e-09!47;UBERON:0003914!1.03e-07!47;UBERON:0002100!1.98e-07!98;UBERON:0005057!9.22e-07!51 | |ontology_enrichment_uberon=UBERON:0002107!5.56e-22!22;UBERON:0007499!5.56e-22!22;UBERON:0006925!5.56e-22!22;UBERON:0009497!5.56e-22!22;UBERON:0000015!5.56e-22!22;UBERON:0002423!5.56e-22!22;UBERON:0006235!5.56e-22!22;UBERON:0008835!5.56e-22!22;UBERON:0003894!5.56e-22!22;UBERON:0004161!5.56e-22!22;UBERON:0008836!5.56e-22!22;UBERON:0009854!8.41e-21!23;UBERON:0009856!8.41e-21!23;UBERON:0005172!4.38e-19!49;UBERON:0005173!4.38e-19!49;UBERON:0002417!4.38e-19!49;UBERON:0000916!4.38e-19!49;UBERON:0002365!9.97e-19!25;UBERON:0002330!9.97e-19!25;UBERON:0009569!2.85e-12!66;UBERON:0005177!1.13e-09!85;UBERON:0005256!9.97e-09!47;UBERON:0003914!1.03e-07!47;UBERON:0002100!1.98e-07!98;UBERON:0005057!9.22e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.43e-40,22;UBERON:0007499,1.43e-40,22;UBERON:0006925,1.43e-40,22;UBERON:0009497,1.43e-40,22;UBERON:0000015,1.43e-40,22;UBERON:0002423,1.43e-40,22;UBERON:0006235,1.43e-40,22;UBERON:0008835,1.43e-40,22;UBERON:0003894,1.43e-40,22;UBERON:0004161,1.43e-40,22;UBERON:0008836,1.43e-40,22;UBERON:0009854,1.01e-38,23;UBERON:0009856,1.01e-38,23;UBERON:0002365,1.84e-35,25;UBERON:0002330,1.84e-35,25;UBERON:0005172,2.01e-25,49;UBERON:0005173,2.01e-25,49;UBERON:0002417,2.01e-25,49;UBERON:0000916,2.01e-25,49;UBERON:0003104,5.97e-20,61;UBERON:0009142,5.97e-20,61;UBERON:0005256,9.01e-19,45;UBERON:0009569,2.97e-18,66;UBERON:0003914,7.00e-18,47;UBERON:0003929,5.79e-15,55;UBERON:0005177,7.68e-15,79;UBERON:0002368,1.56e-13,60;UBERON:0002100,1.02e-12,90;UBERON:0002530,2.54e-12,65;UBERON:0000490,4.22e-12,66;UBERON:0005911,1.78e-11,69;UBERON:0000949,6.62e-11,72;UBERON:0001041,1.37e-09,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,21.0791113449403,5.39703191637817,9.74664626171504,16.1289679355041,0.842666520790511,0,0,0,0,0,0,0,0,0,0,7.9928715803342,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.193952487167626,1.05203729835478,0.505892296994058,1.18088118383682,0.941992367048249,1.35736880313981,2.07516838961004,0,0,0.674586337154561,0.811440485554012,0,0,3.16465751195892,19.9426328933294,2.74561413188081,14.3768206527355,29.7712758134803,6.24075346229121,2.77836765741823,1.97337154874103,30.3939418458921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.991841468704031,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,1.28922632428979,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,21.0791113449403,5.39703191637817,9.74664626171504,16.1289679355041,0.842666520790511,0,0,0,0,0,0,0,0,0,0,7.9928715803342,0,0,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0.193952487167626,1.05203729835478,0.505892296994058,1.18088118383682,0.941992367048249,1.35736880313981,2.07516838961004,0,0,0.674586337154561,0.811440485554012,0,0,3.16465751195892,19.9426328933294,2.74561413188081,14.3768206527355,29.7712758134803,6.24075346229121,2.77836765741823,1.97337154874103,30.3939418458921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.991841468704031,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0.467863216890817,1.28922632428979,0,0,0 | ||
|short_description=p@chr5:90953839..90953865,+ | |short_description=p@chr5:90953839..90953865,+ | ||
}} | }} |
Revision as of 19:35, 14 November 2012
Short description: | p@chr5:90953839..90953865, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:90953839..90953865, + |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.01e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.43e-40 | 22 |
epithelial sac | 1.43e-40 | 22 |
digestive gland | 1.43e-40 | 22 |
epithelium of foregut-midgut junction | 1.43e-40 | 22 |
anatomical boundary | 1.43e-40 | 22 |
hepatobiliary system | 1.43e-40 | 22 |
foregut-midgut junction | 1.43e-40 | 22 |
hepatic diverticulum | 1.43e-40 | 22 |
liver primordium | 1.43e-40 | 22 |
septum transversum | 1.43e-40 | 22 |
liver bud | 1.43e-40 | 22 |
digestive tract diverticulum | 1.01e-38 | 23 |
sac | 1.01e-38 | 23 |
exocrine gland | 1.84e-35 | 25 |
exocrine system | 1.84e-35 | 25 |
abdomen element | 2.01e-25 | 49 |
abdominal segment element | 2.01e-25 | 49 |
abdominal segment of trunk | 2.01e-25 | 49 |
abdomen | 2.01e-25 | 49 |
mesenchyme | 5.97e-20 | 61 |
entire embryonic mesenchyme | 5.97e-20 | 61 |
trunk mesenchyme | 9.01e-19 | 45 |
subdivision of trunk | 2.97e-18 | 66 |
epithelial tube | 7.00e-18 | 47 |
gut epithelium | 5.79e-15 | 55 |
trunk region element | 7.68e-15 | 79 |
endocrine gland | 1.56e-13 | 60 |
trunk | 1.02e-12 | 90 |
gland | 2.54e-12 | 65 |
unilaminar epithelium | 4.22e-12 | 66 |
endo-epithelium | 1.78e-11 | 69 |
endocrine system | 6.62e-11 | 72 |
foregut | 1.37e-09 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.