FFCP PHASE1:Mm9::chr4:22413866..22413881,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:22413866..22413881,- | |id=chr4:22413866..22413881,- | ||
|ontology_enrichment_celltype=CL:0000221!1.75e-21!44;CL:0000133!1.75e-21!44;CL:0002319!1.78e-20!43;CL:0000540!2.35e-20!33;CL:0000047!2.35e-20!33;CL:0000031!2.35e-20!33;CL:0000404!2.35e-20!33;CL:0000055!3.53e-16!50;CL:0000393!7.18e-16!39;CL:0000211!7.18e-16!39;CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0002321!9.41e-10!70;CL:0000220!9.41e-10!70 | |ontology_enrichment_celltype=CL:0000221!1.75e-21!44;CL:0000133!1.75e-21!44;CL:0002319!1.78e-20!43;CL:0000540!2.35e-20!33;CL:0000047!2.35e-20!33;CL:0000031!2.35e-20!33;CL:0000404!2.35e-20!33;CL:0000055!3.53e-16!50;CL:0000393!7.18e-16!39;CL:0000211!7.18e-16!39;CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0002321!9.41e-10!70;CL:0000220!9.41e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.24e-22,23;CL:0000337,2.24e-22,23;CL:0002319,2.60e-18,43;CL:0000540,6.45e-18,33;CL:0000047,6.45e-18,33;CL:0000031,6.45e-18,33;CL:0000404,6.45e-18,33;CL:0000221,7.63e-18,44;CL:0000133,7.63e-18,44;CL:0000393,7.26e-15,39;CL:0000211,7.26e-15,39;CL:0002609,7.69e-13,6;CL:0002321,2.31e-10,70;CL:0002612,4.88e-07,3;CL:0000120,6.41e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.99e-31!73;UBERON:0005743!4.99e-31!73;UBERON:0000073!5.44e-31!75;UBERON:0001016!5.44e-31!75;UBERON:0004121!1.38e-26!102;UBERON:0000924!1.38e-26!102;UBERON:0006601!1.38e-26!102;UBERON:0000033!8.08e-19!63;UBERON:0002346!9.79e-19!71;UBERON:0003075!9.79e-19!71;UBERON:0007284!9.79e-19!71;UBERON:0001049!6.71e-18!52;UBERON:0005068!6.71e-18!52;UBERON:0006241!6.71e-18!52;UBERON:0007135!6.71e-18!52;UBERON:0000955!1.01e-17!50;UBERON:0006238!1.01e-17!50;UBERON:0002616!5.92e-17!49;UBERON:0002020!1.50e-16!34;UBERON:0002791!3.31e-15!29;UBERON:0003528!3.31e-15!29;UBERON:0001893!3.31e-15!29;UBERON:0003056!4.28e-14!49;UBERON:0003080!1.06e-13!40;UBERON:0002780!6.63e-13!39;UBERON:0001890!6.63e-13!39;UBERON:0006240!6.63e-13!39;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0007811!1.17e-10!86;UBERON:0000153!1.86e-09!94;UBERON:0002021!7.38e-08!10;UBERON:0000411!7.38e-08!10;UBERON:0001950!7.38e-08!10;UBERON:0002619!1.74e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!4.99e-31!73;UBERON:0005743!4.99e-31!73;UBERON:0000073!5.44e-31!75;UBERON:0001016!5.44e-31!75;UBERON:0004121!1.38e-26!102;UBERON:0000924!1.38e-26!102;UBERON:0006601!1.38e-26!102;UBERON:0000033!8.08e-19!63;UBERON:0002346!9.79e-19!71;UBERON:0003075!9.79e-19!71;UBERON:0007284!9.79e-19!71;UBERON:0001049!6.71e-18!52;UBERON:0005068!6.71e-18!52;UBERON:0006241!6.71e-18!52;UBERON:0007135!6.71e-18!52;UBERON:0000955!1.01e-17!50;UBERON:0006238!1.01e-17!50;UBERON:0002616!5.92e-17!49;UBERON:0002020!1.50e-16!34;UBERON:0002791!3.31e-15!29;UBERON:0003528!3.31e-15!29;UBERON:0001893!3.31e-15!29;UBERON:0003056!4.28e-14!49;UBERON:0003080!1.06e-13!40;UBERON:0002780!6.63e-13!39;UBERON:0001890!6.63e-13!39;UBERON:0006240!6.63e-13!39;UBERON:0000956!2.99e-11!21;UBERON:0001869!2.99e-11!21;UBERON:0000203!2.99e-11!21;UBERON:0007811!1.17e-10!86;UBERON:0000153!1.86e-09!94;UBERON:0002021!7.38e-08!10;UBERON:0000411!7.38e-08!10;UBERON:0001950!7.38e-08!10;UBERON:0002619!1.74e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.70e-20,34;UBERON:0001017,1.99e-19,73;UBERON:0001016,7.75e-19,75;UBERON:0003528,5.14e-17,29;UBERON:0002791,5.14e-17,29;UBERON:0001893,5.14e-17,29;UBERON:0000073,2.41e-16,54;UBERON:0000956,3.26e-16,21;UBERON:0001869,3.26e-16,21;UBERON:0000203,3.26e-16,21;UBERON:0001049,1.21e-14,52;UBERON:0005068,1.21e-14,52;UBERON:0006241,1.21e-14,52;UBERON:0007135,1.21e-14,52;UBERON:0004121,2.76e-14,95;UBERON:0000924,2.76e-14,95;UBERON:0006601,2.76e-14,95;UBERON:0002346,2.74e-13,64;UBERON:0003075,2.74e-13,64;UBERON:0007284,2.74e-13,64;UBERON:0002780,3.26e-12,39;UBERON:0001890,3.26e-12,39;UBERON:0006240,3.26e-12,39;UBERON:0002616,4.60e-12,46;UBERON:0003080,7.28e-12,40;UBERON:0000955,9.14e-12,47;UBERON:0006238,9.14e-12,47;UBERON:0010371,2.39e-11,73;UBERON:0002021,7.80e-11,10;UBERON:0000411,7.80e-11,10;UBERON:0001950,7.80e-11,10;UBERON:0003056,2.30e-09,49;UBERON:0002619,6.72e-09,17;UBERON:0010314,1.73e-08,92;UBERON:0002257,4.88e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,4.45865332926454,4.3201900266141,2.10324961351382,0,0,2.08234358665422,0.862609239164127,0,0,0.893811366596314,2.30409799884365,0.395658863190582,0.731901148819277,1.04182674111352,0.279182999001381,0,1.83357897332172,2.94628585473668,1.42371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0,0.753926112677186,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.340182495756639,0.768682321709099,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,1.03111909406213,2.74033007908257,0.755393897389701,1.35004500046361,0.900642406448441,0,1.55328093525546,2.28332164685189,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.470546902076653,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.818462086339379,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0.633831403506179,0,0,0,0,0,0.299600110518405,0,4.45865332926454,4.3201900266141,2.10324961351382,0,0,2.08234358665422,0.862609239164127,0,0,0.893811366596314,2.30409799884365,0.395658863190582,0.731901148819277,1.04182674111352,0.279182999001381,0,1.83357897332172,2.94628585473668,1.42371680799103,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0,0.753926112677186,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.340182495756639,0.768682321709099,0.468508622798644,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.234423373184406,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,1.03111909406213,2.74033007908257,0.755393897389701,1.35004500046361,0.900642406448441,0,1.55328093525546,2.28332164685189,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.470546902076653,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.818462086339379,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr4:22413866..22413881,- | |short_description=p@chr4:22413866..22413881,- | ||
}} | }} |
Revision as of 21:50, 14 November 2012
Short description: | p@chr4:22413866..22413881, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:22413866..22413881, - |
Coexpression cluster: | MCL_coexpression_mm9:950 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.24e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-22 | 23 |
neural cell | 2.60e-18 | 43 |
neuron | 6.45e-18 | 33 |
neuronal stem cell | 6.45e-18 | 33 |
neuroblast | 6.45e-18 | 33 |
electrically signaling cell | 6.45e-18 | 33 |
ectodermal cell | 7.63e-18 | 44 |
neurectodermal cell | 7.63e-18 | 44 |
electrically responsive cell | 7.26e-15 | 39 |
electrically active cell | 7.26e-15 | 39 |
neuron of cerebral cortex | 7.69e-13 | 6 |
embryonic cell | 2.31e-10 | 70 |
neuron of the ventral spinal cord | 4.88e-07 | 3 |
granule cell | 6.41e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.