FFCP PHASE1:Mm9::chr19:47125313..47125405,-: Difference between revisions
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|id=chr19:47125313..47125405,- | |id=chr19:47125313..47125405,- | ||
|ontology_enrichment_celltype=CL:0000540!3.10e-11!33;CL:0000047!3.10e-11!33;CL:0000031!3.10e-11!33;CL:0000404!3.10e-11!33;CL:0000393!1.10e-08!39;CL:0000211!1.10e-08!39;CL:0000117!5.05e-07!23;CL:0000337!5.05e-07!23;CL:0000542!9.06e-07!13;CL:0000051!9.06e-07!13 | |ontology_enrichment_celltype=CL:0000540!3.10e-11!33;CL:0000047!3.10e-11!33;CL:0000031!3.10e-11!33;CL:0000404!3.10e-11!33;CL:0000393!1.10e-08!39;CL:0000211!1.10e-08!39;CL:0000117!5.05e-07!23;CL:0000337!5.05e-07!23;CL:0000542!9.06e-07!13;CL:0000051!9.06e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.10e-11,33;CL:0000047,3.10e-11,33;CL:0000031,3.10e-11,33;CL:0000404,3.10e-11,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0000117,5.05e-07,23;CL:0000337,5.05e-07,23;CL:0000542,9.06e-07,13;CL:0000051,9.06e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.09e-11!94;UBERON:0001017!7.89e-11!73;UBERON:0005743!7.89e-11!73;UBERON:0007811!1.12e-10!86;UBERON:0000073!1.58e-10!75;UBERON:0001016!1.58e-10!75;UBERON:0002020!6.31e-09!34;UBERON:0004121!3.46e-08!102;UBERON:0000924!3.46e-08!102;UBERON:0006601!3.46e-08!102;UBERON:0003056!8.85e-08!49;UBERON:0001049!1.00e-07!52;UBERON:0005068!1.00e-07!52;UBERON:0006241!1.00e-07!52;UBERON:0007135!1.00e-07!52;UBERON:0002346!1.26e-07!71;UBERON:0003075!1.26e-07!71;UBERON:0007284!1.26e-07!71;UBERON:0000033!1.71e-07!63;UBERON:0002791!3.42e-07!29;UBERON:0003528!3.42e-07!29;UBERON:0001893!3.42e-07!29 | |ontology_enrichment_uberon=UBERON:0000153!2.09e-11!94;UBERON:0001017!7.89e-11!73;UBERON:0005743!7.89e-11!73;UBERON:0007811!1.12e-10!86;UBERON:0000073!1.58e-10!75;UBERON:0001016!1.58e-10!75;UBERON:0002020!6.31e-09!34;UBERON:0004121!3.46e-08!102;UBERON:0000924!3.46e-08!102;UBERON:0006601!3.46e-08!102;UBERON:0003056!8.85e-08!49;UBERON:0001049!1.00e-07!52;UBERON:0005068!1.00e-07!52;UBERON:0006241!1.00e-07!52;UBERON:0007135!1.00e-07!52;UBERON:0002346!1.26e-07!71;UBERON:0003075!1.26e-07!71;UBERON:0007284!1.26e-07!71;UBERON:0000033!1.71e-07!63;UBERON:0002791!3.42e-07!29;UBERON:0003528!3.42e-07!29;UBERON:0001893!3.42e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-11,73;UBERON:0001016,1.58e-10,75;UBERON:0004121,2.95e-10,95;UBERON:0000924,2.95e-10,95;UBERON:0006601,2.95e-10,95;UBERON:0002346,3.87e-10,64;UBERON:0003075,3.87e-10,64;UBERON:0007284,3.87e-10,64;UBERON:0010371,3.69e-09,73;UBERON:0002020,6.31e-09,34;UBERON:0003056,8.85e-08,49;UBERON:0001049,1.00e-07,52;UBERON:0005068,1.00e-07,52;UBERON:0006241,1.00e-07,52;UBERON:0007135,1.00e-07,52;UBERON:0000073,1.21e-07,54;UBERON:0003528,3.42e-07,29;UBERON:0002791,3.42e-07,29;UBERON:0001893,3.42e-07,29 | |||
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| ||
|short_description=p1@Pcgf6 | |short_description=p1@Pcgf6 | ||
}} | }} |
Revision as of 03:26, 15 November 2012
Short description: | p1@Pcgf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcgf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 0bp_to_ENSMUST00000026032, ENSMUST00000164903, NM_027654, uc008hul.1, uc008hum.1, uc012bnb.1_5end |
EntrezGene: | Pcgf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.10e-11 | 33 |
neuronal stem cell | 3.10e-11 | 33 |
neuroblast | 3.10e-11 | 33 |
electrically signaling cell | 3.10e-11 | 33 |
electrically responsive cell | 1.10e-08 | 39 |
electrically active cell | 1.10e-08 | 39 |
CNS neuron (sensu Vertebrata) | 5.05e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-07 | 23 |
lymphocyte | 9.06e-07 | 13 |
common lymphoid progenitor | 9.06e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.89e-11 | 73 |
nervous system | 1.58e-10 | 75 |
ectoderm-derived structure | 2.95e-10 | 95 |
ectoderm | 2.95e-10 | 95 |
presumptive ectoderm | 2.95e-10 | 95 |
neurectoderm | 3.87e-10 | 64 |
neural plate | 3.87e-10 | 64 |
presumptive neural plate | 3.87e-10 | 64 |
ecto-epithelium | 3.69e-09 | 73 |
gray matter | 6.31e-09 | 34 |
pre-chordal neural plate | 8.85e-08 | 49 |
neural tube | 1.00e-07 | 52 |
neural rod | 1.00e-07 | 52 |
future spinal cord | 1.00e-07 | 52 |
neural keel | 1.00e-07 | 52 |
regional part of nervous system | 1.21e-07 | 54 |
brain grey matter | 3.42e-07 | 29 |
regional part of telencephalon | 3.42e-07 | 29 |
telencephalon | 3.42e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.