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FFCP PHASE1:Mm9::chr4:154865462..154865520,+: Difference between revisions

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|id=chr4:154865462..154865520,+
|id=chr4:154865462..154865520,+
|ontology_enrichment_celltype=CL:0000221!2.50e-14!44;CL:0000133!2.50e-14!44;CL:0002319!4.18e-14!43;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0002321!1.24e-12!70;CL:0000220!1.24e-12!70;CL:0000055!9.53e-12!50;CL:0000393!2.62e-10!39;CL:0000211!2.62e-10!39
|ontology_enrichment_celltype=CL:0000221!2.50e-14!44;CL:0000133!2.50e-14!44;CL:0002319!4.18e-14!43;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23;CL:0000540!1.01e-12!33;CL:0000047!1.01e-12!33;CL:0000031!1.01e-12!33;CL:0000404!1.01e-12!33;CL:0002321!1.24e-12!70;CL:0000220!1.24e-12!70;CL:0000055!9.53e-12!50;CL:0000393!2.62e-10!39;CL:0000211!2.62e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.50e-14,44;CL:0000133,2.50e-14,44;CL:0002319,4.18e-14,43;CL:0000117,1.21e-13,23;CL:0000337,1.21e-13,23;CL:0000540,1.01e-12,33;CL:0000047,1.01e-12,33;CL:0000031,1.01e-12,33;CL:0000404,1.01e-12,33;CL:0002321,1.24e-12,70;CL:0000393,2.62e-10,39;CL:0000211,2.62e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.05e-24!75;UBERON:0001016!2.05e-24!75;UBERON:0001017!1.86e-23!73;UBERON:0005743!1.86e-23!73;UBERON:0001049!5.38e-19!52;UBERON:0005068!5.38e-19!52;UBERON:0006241!5.38e-19!52;UBERON:0007135!5.38e-19!52;UBERON:0000955!1.12e-17!50;UBERON:0006238!1.12e-17!50;UBERON:0002616!2.43e-17!49;UBERON:0002020!1.29e-16!34;UBERON:0003080!1.85e-15!40;UBERON:0002780!5.07e-15!39;UBERON:0001890!5.07e-15!39;UBERON:0006240!5.07e-15!39;UBERON:0004121!8.66e-15!102;UBERON:0000924!8.66e-15!102;UBERON:0006601!8.66e-15!102;UBERON:0002346!5.25e-14!71;UBERON:0003075!5.25e-14!71;UBERON:0007284!5.25e-14!71;UBERON:0000033!5.57e-14!63;UBERON:0002791!9.76e-14!29;UBERON:0003528!9.76e-14!29;UBERON:0001893!9.76e-14!29;UBERON:0003056!6.05e-13!49;UBERON:0000956!1.14e-09!21;UBERON:0001869!1.14e-09!21;UBERON:0000203!1.14e-09!21;UBERON:0002619!1.02e-07!17;UBERON:0007811!7.07e-07!86
|ontology_enrichment_uberon=UBERON:0000073!2.05e-24!75;UBERON:0001016!2.05e-24!75;UBERON:0001017!1.86e-23!73;UBERON:0005743!1.86e-23!73;UBERON:0001049!5.38e-19!52;UBERON:0005068!5.38e-19!52;UBERON:0006241!5.38e-19!52;UBERON:0007135!5.38e-19!52;UBERON:0000955!1.12e-17!50;UBERON:0006238!1.12e-17!50;UBERON:0002616!2.43e-17!49;UBERON:0002020!1.29e-16!34;UBERON:0003080!1.85e-15!40;UBERON:0002780!5.07e-15!39;UBERON:0001890!5.07e-15!39;UBERON:0006240!5.07e-15!39;UBERON:0004121!8.66e-15!102;UBERON:0000924!8.66e-15!102;UBERON:0006601!8.66e-15!102;UBERON:0002346!5.25e-14!71;UBERON:0003075!5.25e-14!71;UBERON:0007284!5.25e-14!71;UBERON:0000033!5.57e-14!63;UBERON:0002791!9.76e-14!29;UBERON:0003528!9.76e-14!29;UBERON:0001893!9.76e-14!29;UBERON:0003056!6.05e-13!49;UBERON:0000956!1.14e-09!21;UBERON:0001869!1.14e-09!21;UBERON:0000203!1.14e-09!21;UBERON:0002619!1.02e-07!17;UBERON:0007811!7.07e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.05e-24,75;UBERON:0001017,1.86e-23,73;UBERON:0000073,2.66e-20,54;UBERON:0001049,5.38e-19,52;UBERON:0005068,5.38e-19,52;UBERON:0006241,5.38e-19,52;UBERON:0007135,5.38e-19,52;UBERON:0004121,1.10e-16,95;UBERON:0000924,1.10e-16,95;UBERON:0006601,1.10e-16,95;UBERON:0002020,1.29e-16,34;UBERON:0002346,1.65e-16,64;UBERON:0003075,1.65e-16,64;UBERON:0007284,1.65e-16,64;UBERON:0000955,4.90e-16,47;UBERON:0006238,4.90e-16,47;UBERON:0002616,1.05e-15,46;UBERON:0003080,1.85e-15,40;UBERON:0002780,5.07e-15,39;UBERON:0001890,5.07e-15,39;UBERON:0006240,5.07e-15,39;UBERON:0003528,9.76e-14,29;UBERON:0002791,9.76e-14,29;UBERON:0001893,9.76e-14,29;UBERON:0003056,6.05e-13,49;UBERON:0010371,2.32e-12,73;UBERON:0010314,1.09e-09,92;UBERON:0000956,1.14e-09,21;UBERON:0001869,1.14e-09,21;UBERON:0000203,1.14e-09,21;UBERON:0011216,1.37e-08,194;UBERON:0002619,1.02e-07,17;UBERON:0000160,5.14e-07,31
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298,180.547686808642,187.821287689112,171.661491027879,184.51636636552,171.682312947877,160.182397195701,189.773057938421,253.00842786558,125.510541243559,168.544188666573,162.973035187937,200.039314962631,215.646367873549,226.54633037994,205.619604722277,203.732166289029,209.759263983604,215.800530828113,184.087100069417,137.390312985002,113.764003426144,176.370937302443,142.357386630451,141.353855399841,147.87605062134,144.242663571198,129.931280931086,127.012993370136,115.606585190629,122.769165521205,127.040993272419,116.949456887703,126.710995440314,128.447715497544,100.668290325154,86.5745218158852,108.105197214418,195.585578064151,175.802530569293,192.562219812913,171.42992031416,150.915338871662,212.165000006959,341.110112940708,307.036932750287,325.404651633577,344.909336963781,289.789905862982,299.135983366321,284.18447259759,249.027625382994,236.087195080771,265.611039928684,283.339458904802,209.887083408942,185.758163060498,144.891603372703,221.141886572521,284.222064063722,186.020511169952,192.848813575605,208.918405444272,201.146980563983,193.658185116143,191.455736506867,188.874920566753,196.685268187758,176.958679852244,180.515308996285,223.309096095737,219.72360210816,194.916631079964,194.302574577404,194.749735354916,204.807080307875,203.147633835117,211.62438261667,198.664902056763,202.144298253215,195.550003000994,194.408516752566,206.42225304571,205.378071426732,212.949857532893,224.393210851534,229.578615218196,206.840682983265,160.691206947291,214.837097026634,162.582467869559,138.806700915201,146.144285700596,138.752002626175,133.555873317363
|phase1_expression=204.670226599927,962.823149676997,829.918612646514,1062.55677432089,1152.56107460654,289.59174404801,300.659468446442,128.348583500927,172.32539591364,217.21188042681,110.606807473676,108.96876918763,112.13647810494,115.569771997915,87.2747575957036,106.299515379659,64.3596927877895,112.77772411557,118.603985068964,109.492530163892,170.596840043046,127.191708488334,123.286300473577,277.906838392147,309.473120159612,775.213151555277,580.236408826274,430.511522906406,479.239063868975,467.515890704672,312.196559002669,70.4884047540191,82.4186815363324,15.8481681015439,134.893706423845,148.447538305134,143.93939616497,290.042420100677,211.74187836595,229.826923604497,223.527965451785,274.584284953295,272.371308050477,90.3939153064645,88.9075686795143,89.937908559224,197.945010120054,247.676577648187,213.754655800641,237.787766567849,246.236115639013,222.816474765706,150.165432421674,163.931844094564,126.707362276709,264.462700244954,232.378619790332,248.03827638545,400.384276041144,374.525613324599,443.048151050819,249.050731070812,233.88453137723,250.62207126287,218.539466127301,236.589878277051,211.517678025994,197.872427240601,330.458794427118,343.725118992484,354.397559877079,408.480907697439,371.721754421566,361.715330081759,389.324303276076,449.4979866523,335.853437048136,361.355166781081,346.075519426317,465.954254550775,473.723018573277,452.152805643268,284.487475982407,265.061189324921,290.469469023716,331.457158657876,362.193555952918,376.899679458758,283.518867839441,296.618373419133,243.776034998111,189.293252935905,88.3962733820076,53.9703191637817,65.6274181622146,60.035602871043,119.377757111989,174.520650319931,170.939191028688,167.836297892412,237.60284916326,234.837453668202,608.984522898883,1059.48938769846,231.428922840988,244.745630048945,226.474951366623,162.82621247938,124.290184150642,174.864839818364,178.863371895886,167.151547593366,171.577929958508,150.421195271517,138.401908298725,177.818226731491,228.160955218827,145.611552418351,133.576193344431,130.707614757507,109.537393156355,125.582690562023,225.534031073928,184.451902117275,189.549269666177,286.878272999248,90.220788752958,134.378211742523,103.562235064548,292.541118757619,318.420419561764,415.790251141468,325.225303079749,352.375900201195,316.876767953329,309.394088670214,190.439610400091,130.751726111208,133.690339211414,174.035414818114,165.383083005596,210.130523452194,206.711325016541,194.86132946158,171.043758866438,159.629695474923,194.524780185997,189.629570751698,207.160841208461,167.35888094852,163.9864477208,165.273582250391,142.916286101957,145.917657772788,144.253277621968,159.028379187976,134.122718776828,112.97573122336,117.35952525038,176.885409745319,160.41582502707,166.917530974361,166.668293851988,172.955759705968,172.779166433864,161.378557656783,181.084545944743,177.833616425199,167.85104691175,140.855684179864,116.739085746032,114.620790141461,134.145120442832,125.885620797229,251.927358379824,356.358672669462,437.144049887565,342.46348382929,172.336906432469,198.562354440675,173.971072784826,198.254904704746,236.832616694787,237.021130136249,308.443890003933,249.848314316324,210.618904974626,223.428118102212,204.517327387957,245.377698562602,269.524148193744,255.498253585353,188.529893547363,182.226377612517,184.840686503852,166.586786177467,177.660478245545,159.138175331133,148.922044927626,124.435354746805,140.984857601555,140.549369706931,76.1883251613973,102.276049803966,94.5448766494506,103.661433809418,96.5614177809274,105.876773131311,109.489116266011,111.913797468365,79.1219906662173,96.9201788553928,104.950790764969,99.3616330274904,113.893750686815,96.2325524978496,85.3931688364302,91.6642690590398,252.372857767582,197.260559653075,210.876679515981,182.985202465653,182.823703416743,186.266958275299,208.526229416148,222.062091262175,212.334539111039,197.767967856356,226.585226262289,244.320202241165,250.220538723683,245.614101471407,183.965366405912,262.706445284437,111.630489975321,112.030318999721,282.729588968502,269.469667475475,160.984116359895,89.8796500847568,197.508145354577,206.932534477218,208.099002209884,202.406571865812,198.513618607413,264.959632818347,190.665840488875,218.31512585975,237.172666767914,262.519515516616,150.598430405973,206.199969046682,172.985950833498,146.163528953666,115.488270355768,159.021316681513,159.324514520424,138.624733620585,196.375758765714,177.390080363646,182.967231563101,134.507479906677,140.103469705195,111.877012309279,148.640238090748,113.449097573006,199.838048577474,216.793557213698,223.661164260383,242.415186620731,215.29104364172,230.274143524273,230.039530801765,206.122770550584,185.390649370331,205.688940808769,162.088372570397,146.748765117917,135.468653997865,124.847754601283,131.428950747453,123.598097508031,243.095017749295,276.283699995659,107.648654902647,182.858765015415,137.414339308326,100.023650669491,82.4266193157782,111.643748524783,127.823779355379,114.620239453076,134.053974590291,171.84071124272,202.929539882298,180.547686808642,187.821287689112,171.661491027879,184.51636636552,171.682312947877,160.182397195701,189.773057938421,253.00842786558,125.510541243559,168.544188666573,162.973035187937,200.039314962631,215.646367873549,226.54633037994,205.619604722277,203.732166289029,209.759263983604,215.800530828113,184.087100069417,137.390312985002,113.764003426144,176.370937302443,142.357386630451,141.353855399841,147.87605062134,144.242663571198,129.931280931086,127.012993370136,115.606585190629,122.769165521205,127.040993272419,116.949456887703,126.710995440314,128.447715497544,100.668290325154,86.5745218158852,108.105197214418,195.585578064151,175.802530569293,192.562219812913,171.42992031416,150.915338871662,212.165000006959,341.110112940708,307.036932750287,325.404651633577,344.909336963781,289.789905862982,299.135983366321,284.18447259759,249.027625382994,236.087195080771,265.611039928684,283.339458904802,209.887083408942,185.758163060498,144.891603372703,221.141886572521,284.222064063722,186.020511169952,192.848813575605,208.918405444272,201.146980563983,193.658185116143,191.455736506867,188.874920566753,196.685268187758,176.958679852244,180.515308996285,223.309096095737,219.72360210816,194.916631079964,194.302574577404,194.749735354916,204.807080307875,203.147633835117,211.62438261667,198.664902056763,202.144298253215,195.550003000994,194.408516752566,206.42225304571,205.378071426732,212.949857532893,224.393210851534,229.578615218196,206.840682983265,160.691206947291,214.837097026634,162.582467869559,138.806700915201,146.144285700596,138.752002626175,133.555873317363
|short_description=p1@Gnb1
|short_description=p1@Gnb1
}}
}}

Revision as of 05:29, 15 November 2012

Short description:p1@Gnb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gnb1_5end
Coexpression cluster:MCL_coexpression_mm9:1361
Association with transcript: 0bp_to_ENSMUST00000030940, ENSMUST00000105616, ENSMUST00000165335, NM_001160016, NM_001160017, NM_008142, uc008wdp.2, uc008wdq.2, uc008wdr.2_5end
EntrezGene:Gnb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gnb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7204.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5962.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6829.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I31062.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I41152.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7289.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8300.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9128.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7172.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2217.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6110.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1108.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4112.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8115.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A187.27
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3106.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A564.36
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2112.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4118.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6109.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3170.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2127.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9123.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1277.91
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2309.47
GP2+ M cell, pool1.CNhs13228.11845-124H9775.21
GP2+ M cell, pool2.CNhs13231.11846-124I1580.24
GP2+ M cell, pool3.CNhs13240.11847-124I2430.51
Ileum epithelium, pool1.CNhs13199.10252-104B9479.24
Ileum epithelium, pool2.CNhs13232.10253-104C1467.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8312.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I370.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G682.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5134.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6148.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7143.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8290.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1211.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3229.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9223.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2274.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4272.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D890.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D988.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B389.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7197.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2247.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8213.75
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3237.79
Mouse Astrocytes, donor2.CNhs12078.11552-120C4246.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C4222.82
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2150.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9163.93
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1126.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1264.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1232.38
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5248.04
Mouse Granule cells, donor1.CNhs12131.11713-123C3400.38
Mouse Granule cells, donor2.CNhs12357.11731-123E3374.53
Mouse Granule cells, donor3.CNhs12108.11636-122C7443.05
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6249.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1233.88
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7250.62
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7218.54
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2236.59
Mouse Microglia, donor1.CNhs12629.11718-123C8211.52
Mouse Microglia, donor2.CNhs12634.11736-123E8197.87
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5330.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5343.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9354.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1408.48
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5371.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2361.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2389.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6449.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3335.85
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3361.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7346.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4465.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4473.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8452.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4284.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5265.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6290.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6331.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6362.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1376.90
Mouse Schwann, donor1.CNhs12507.11728-123D9283.52
Mouse Schwann, donor2.CNhs12573.11746-123F9296.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3243.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7189.29
Mouse hepatocyte, donor1.CNhs13078.11714-123C488.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C853.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F465.63
Mouse hepatocyte, donor8.CNhs13091.11824-124F660.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7119.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7174.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3170.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8167.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6237.60
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1234.84
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8608.98
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B61059.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1231.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2244.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3226.47
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6162.83
accessory axillary lymph node, adult.CNhs10475.1063-29H9124.29
adrenal gland, adult.CNhs10508.49-24D7174.86
adrenal gland, embryo E14.CNhs11038.406-44C5178.86
adrenal gland, embryo E16.CNhs11004.1254-43D6167.15
adrenal gland, embryo E17.CNhs11043.1263-45I1171.58
adrenal gland, embryo E18.CNhs11026.1262-18F5150.42
adrenal gland, neonate N00.CNhs11191.1311-23C1138.40
adrenal gland, neonate N25.CNhs11223.1377-27I3177.82
amnion, adult pregnant day17.5.CNhs10488.583-22A8228.16
aorta, adult.CNhs10498.46-23H1145.61
bone (os femoris), adult.CNhs10483.56-12G2133.58
bone (os femoris), neonate N02.CNhs11227.1985-43F5130.71
bone (os femoris), neonate N16.CNhs11225.1525-43A6109.54
bone (os femoris), neonate N20.CNhs11195.1350-25C3125.58
cecum, adult.CNhs10467.37-13H4225.53
cerebellum, adult.CNhs10494.15-8B2184.45
cerebellum, neonate N30.CNhs11135.1395-42I2189.55
colon, adult.CNhs10468.36-18H7286.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C790.22
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1134.38
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4103.56
corpora quadrigemina, adult.CNhs10501.16-22A4292.54
corpus striatum, adult.CNhs10487.19-21D8318.42
corpus striatum, neonate N00.CNhs11226.630-43F1415.79
cortex, adult.CNhs10473.12-14D5325.23
cortex, neonate N30.CNhs11107.1392-42F2352.38
diencephalon, adult.CNhs10482.20-12F2316.88
diencephalon, neonate N30.CNhs11201.1388-42B2309.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1190.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2130.75
epididymis, adult.CNhs10490.58-23B2133.69
eyeball, adult.CNhs10484.31-12G4174.04
eyeball, embryo E12.CNhs11016.345-16C6165.38
eyeball, embryo E14.CNhs10521.399-16E2210.13
eyeball, embryo E15.CNhs10593.426-16C9206.71
eyeball, embryo E17.CNhs11023.1261-18D4194.86
eyeball, neonate N00.CNhs11207.633-15C6171.04
eyeball, neonate N01.CNhs11140.1532-43E7159.63
eyeball, neonate N02.CNhs11205.1551-44G8194.52
eyeball, neonate N16.CNhs11188.777-19A2189.63
forelimb, embryo E11.CNhs10596.335-25E2207.16
forelimb, embryo E12.CNhs10600.359-14H2167.36
forelimb, embryo E13.CNhs10589.384-1E2163.99
forelimb, embryo E14.CNhs10577.413-26A8165.27
forelimb, embryo E15.CNhs11007.437-20E7142.92
forelimb, embryo E17.CNhs10598.1517-43C4145.92
forelimb, embryo E18.CNhs11008.1520-43B5144.25
gonad, embryo E13.CNhs11044.1564-45I6159.03
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8134.12
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2112.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5117.36
heart, embryo E11.CNhs10586.331-24E9176.89
heart, embryo E12.CNhs11015.353-12F5160.42
heart, embryo E13.CNhs11013.376-3I9166.92
heart, embryo E14.CNhs10597.403-26D4166.67
heart, embryo E15.CNhs11017.431-16C8172.96
heart, embryo E16.CNhs11021.457-17C6172.78
heart, embryo E17.CNhs11025.479-18E5161.38
heart, embryo E18.CNhs11030.1283-20G3181.08
heart, neonate N00.CNhs11213.639-21E3177.83
heart, neonate N03.CNhs11221.1349-25I2167.85
heart, neonate N10.CNhs11118.749-24G1140.86
heart, neonate N16.CNhs11209.782-15G1116.74
heart, neonate N20.CNhs11127.821-26I6114.62
heart, neonate N25.CNhs11196.1351-25D3134.15
heart, neonate N30.CNhs11202.1390-42D2125.89
hippocampus, adult.CNhs10478.13-16E8251.93
hippocampus, neonate N00.CNhs11228.627-43G1356.36
intestinal mucosa, adult.CNhs10506.860-29I3437.14
intestine, adult.CNhs10496.178-9A3342.46
intestine, embryo E12.CNhs11019.1251-16I5172.34
intestine, embryo E13.CNhs11010.381-16D5198.56
intestine, embryo E15.CNhs10602.976-16D8173.97
intestine, embryo E16.CNhs10585.463-22H4198.25
intestine, embryo E17.CNhs10582.482-18D3236.83
intestine, embryo E18.CNhs10526.1289-20F7237.02
intestine, neonate N00.CNhs11126.644-26D1308.44
intestine, neonate N01.CNhs11192.1322-23E9249.85
intestine, neonate N06.CNhs11102.688-20B8210.62
intestine, neonate N07.CNhs11095.720-20F2223.43
intestine, neonate N10.CNhs11098.755-23A5204.52
intestine, neonate N20.CNhs11187.827-18D1245.38
intestine, neonate N25.CNhs11121.1352-25E3269.52
intestine, neonate N30.CNhs11131.1384-42G1255.50
kidney, embryo E14.CNhs10606.411-4I9188.53
kidney, embryo E15.CNhs10997.434-16F8182.23
kidney, embryo E16.CNhs10584.464-22A5184.84
kidney, embryo E17.CNhs11028.483-18I2166.59
kidney, embryo E18.CNhs11001.1288-20C7177.66
kidney, neonate N00.CNhs11214.646-21G7159.14
kidney, neonate N10.CNhs11206.758-6D5148.92
kidney, neonate N20.CNhs11113.832-19I1124.44
kidney, neonate N25.CNhs11122.1353-25F3140.98
kidney, neonate N30.CNhs11203.1385-42H1140.55
liver, adult pregnant day01.CNhs10466.508-5B276.19
liver, embryo E12.CNhs10601.355-15F8102.28
liver, embryo E13.CNhs10524.378-3H694.54
liver, embryo E14.CNhs10594.409-16E1103.66
liver, embryo E15.CNhs10520.433-16D796.56
liver, embryo E16.CNhs10523.462-17F5105.88
liver, embryo E17.CNhs10510.481-18A3109.49
liver, embryo E18.CNhs10579.499-43G4111.91
liver, neonate N00.CNhs11117.641-24F479.12
liver, neonate N03.CNhs11123.1345-25G296.92
liver, neonate N06.CNhs11101.684-20A8104.95
liver, neonate N07.CNhs11103.716-20H299.36
liver, neonate N10.CNhs11115.751-24B9113.89
liver, neonate N20.CNhs11220.823-25A396.23
liver, neonate N25.CNhs11198.1368-26H185.39
liver, neonate N30.CNhs11106.1382-42D191.66
lung, adult.CNhs10474.28-22B1252.37
lung, embryo E12.CNhs10522.354-16G2197.26
lung, embryo E14.CNhs10604.404-26F8210.88
lung, embryo E15.CNhs11020.432-17C5182.99
lung, embryo E16.CNhs10998.458-17B6182.82
lung, embryo E17.CNhs10605.480-44A6186.27
lung, embryo E18.CNhs10583.1287-20I6208.53
lung, neonate N00.CNhs11224.640-42C6222.06
lung, neonate N06.CNhs11212.683-20E5212.33
lung, neonate N07.CNhs11111.715-19A3197.77
lung, neonate N10.CNhs11219.750-23E6226.59
lung, neonate N20.CNhs11109.822-18A4244.32
lung, neonate N25.CNhs11119.1359-25C7250.22
lung, neonate N30.CNhs11133.1394-42H2245.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1183.97
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1262.71
mammary gland, adult lactating day02.CNhs10480.595-22B6111.63
mammary gland, adult pregnant day19.CNhs10476.588-5H2112.03
medulla oblongata, adult.CNhs10477.17-12C2282.73
medulla oblongata, neonate N30.CNhs11200.1396-42A3269.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7160.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C289.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1197.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2206.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3208.10
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7202.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8198.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9264.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4190.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5218.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6237.17
olfactory brain, adult.CNhs10489.18-22I9262.52
ovary, adult.CNhs10507.91-2I7150.60
ovary, embryo E18.CNhs11040.505-44H7206.20
ovary, neonate N00.CNhs11217.1299-22I4172.99
oviduct, adult pregnant day01.CNhs10500.988-6G6146.16
pancreas, adult.CNhs10486.34-16E4115.49
pancreas, embryo E14.CNhs11012.405-44F4159.02
pancreas, embryo E15.CNhs11042.1556-45F2159.32
pancreas, embryo E16.CNhs11003.460-26E5138.62
pancreas, embryo E17.CNhs10599.1558-45G3196.38
pancreas, embryo E18.CNhs10580.1535-43I7177.39
pancreas, neonate N00.CNhs11105.645-26G9182.97
pancreas, neonate N01.CNhs11138.1531-43D7134.51
pancreas, neonate N02.CNhs11139.1539-43D8140.10
pancreas, neonate N16.CNhs11136.787-43B6111.88
pancreas, neonate N25.CNhs11094.1555-45E2148.64
pancreas, neonate N30.CNhs11182.1548-44H5113.45
pituitary gland, adult.CNhs10493.21-1G8199.84
pituitary gland, embryo E12.CNhs11018.346-16E6216.79
pituitary gland, embryo E13.CNhs11009.370-44C7223.66
pituitary gland, embryo E14.CNhs11037.398-44A5242.42
pituitary gland, embryo E15.CNhs10592.427-16B9215.29
pituitary gland, embryo E16.CNhs11036.449-43F6230.27
pituitary gland, embryo E17.CNhs11039.1265-44F5230.04
pituitary gland, neonate N00.CNhs11190.1308-22E9206.12
placenta, adult pregnant day10.CNhs10472.539-13I7185.39
placenta, adult pregnant day17.CNhs10464.577-18G3205.69
prostate, adult.CNhs10470.859-1F8162.09
skin, adult.CNhs10492.30-1C3146.75
skin, neonate N00.CNhs11124.650-25G4135.47
skin, neonate N03.CNhs11215.662-22H3124.85
skin, neonate N06.CNhs11097.693-20I5131.43
skin, neonate N10.CNhs11108.762-6C4123.60
small intestine, neonate N16.CNhs11114.790-21I1243.10
spinal cord, adult.CNhs10505.24-13C9276.28
spleen, adult.CNhs10465.25-2G2107.65
spleen, embryo E16.CNhs11035.461-43C1182.86
spleen, embryo E18.CNhs11011.1271-21F2137.41
spleen, neonate N10.CNhs11116.752-24D1100.02
spleen, neonate N20.CNhs11112.824-19H182.43
spleen, neonate N25.CNhs11099.1354-25G3111.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6127.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9114.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3134.05
stomach, adult.CNhs10503.33-1H6171.84
stomach, embryo E12.CNhs10588.356-43E3202.93
stomach, embryo E15.CNhs10603.1252-16G8180.55
stomach, embryo E16.CNhs11022.459-17D4187.82
stomach, embryo E17.CNhs11006.1035-18D5171.66
stomach, embryo E18.CNhs10999.1286-20C6184.52
stomach, neonate N03.CNhs11193.1340-24B8171.68
stomach, neonate N07.CNhs11210.718-18A9160.18
stomach, neonate N25.CNhs11104.1355-25E4189.77
stomach, neonate N30.CNhs11134.1386-42I1253.01
submandibular gland, adult.CNhs10469.59-29C1125.51
testis, adult.CNhs10504.57-7G5168.54
testis, embryo E13.CNhs11031.389-23F5162.97
testis, embryo E15.CNhs11034.443-27C5200.04
testis, embryo E16.CNhs11033.470-26G5215.65
testis, embryo E17.CNhs11029.486-18I5226.55
testis, embryo E18.CNhs11027.503-18G5205.62
testis, neonate N00.CNhs11189.1300-22B7203.73
testis, neonate N07.CNhs11222.726-26I4209.76
testis, neonate N10.CNhs11204.763-44D9215.80
testis, neonate N20.CNhs11110.839-18H3184.09
testis, neonate N30.CNhs11130.1391-42E2137.39
thymus, adult.CNhs10471.38-12B5113.76
thymus, embryo E14.CNhs11041.402-44I4176.37
thymus, embryo E15.CNhs11005.430-45I2142.36
thymus, embryo E16.CNhs11002.456-26C5141.35
thymus, embryo E17.CNhs10581.478-18C1147.88
thymus, embryo E18.CNhs10595.1273-19G4144.24
thymus, neonate N02.CNhs11181.1541-43F8129.93
thymus, neonate N03.CNhs11137.2104-43C7127.01
thymus, neonate N06.CNhs11197.681-26C4115.61
thymus, neonate N07.CNhs11211.713-19D3122.77
thymus, neonate N10.CNhs11194.748-24E4127.04
thymus, neonate N20.CNhs11186.820-7A2116.95
thymus, neonate N25.CNhs11125.1362-25G7126.71
thymus, neonate N30.CNhs11132.1393-42G2128.45
tongue, adult.CNhs10499.32-1B4100.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H386.57
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7108.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5195.59
urinary bladder, adult.CNhs10481.879-12E4175.80
uterus, adult pregnant day19.CNhs10497.590-15F5192.56
uterus, adult.CNhs10509.92-27E5171.43
vagina, adult.CNhs10502.89-27D5150.92
vesicular gland, adult.CNhs10491.51-27F8212.17
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1341.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2307.04
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3325.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7344.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4289.79
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5299.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6284.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7249.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8236.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9265.61
whole body, embryo E11.CNhs11014.324-5I8283.34
whole body, embryo E12.CNhs10587.857-27C9209.89
whole body, embryo E13.CNhs10512.372-23H2185.76
whole body, embryo E14.5.CNhs10578.420-27D2144.89
whole body, embryo E14.CNhs10519.395-14B1221.14
whole body, embryo E16.CNhs10514.453-14F2284.22
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5186.02
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5192.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5208.92
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5201.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5193.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5191.46
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5188.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5196.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5176.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5180.52
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5223.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5219.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5194.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5194.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5194.75
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5204.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5203.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5211.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5198.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5202.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5195.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5194.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5206.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5205.38
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5212.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5224.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5229.58
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5206.84
whole body, embryo E17.5.CNhs10513.490-9F9160.69
whole body, embryo E17.CNhs10517.475-3I5214.84
whole body, embryo E18.CNhs10516.493-3B3162.58
whole body, neonate N00.CNhs10525.657-19C2138.81
whole body, neonate N01.CNhs10576.659-23C6146.14
whole body, neonate N06.CNhs10515.692-21D1138.75
whole body, neonate N10.CNhs10518.761-6B4133.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.50e-1444
neurectodermal cell2.50e-1444
neural cell4.18e-1443
CNS neuron (sensu Vertebrata)1.21e-1323
neuroblast (sensu Vertebrata)1.21e-1323
neuron1.01e-1233
neuronal stem cell1.01e-1233
neuroblast1.01e-1233
electrically signaling cell1.01e-1233
embryonic cell1.24e-1270
electrically responsive cell2.62e-1039
electrically active cell2.62e-1039

Uber anatomy
Ontology termp-valuen
nervous system2.05e-2475
central nervous system1.86e-2373
regional part of nervous system2.66e-2054
neural tube5.38e-1952
neural rod5.38e-1952
future spinal cord5.38e-1952
neural keel5.38e-1952
ectoderm-derived structure1.10e-1695
ectoderm1.10e-1695
presumptive ectoderm1.10e-1695
gray matter1.29e-1634
neurectoderm1.65e-1664
neural plate1.65e-1664
presumptive neural plate1.65e-1664
brain4.90e-1647
future brain4.90e-1647
regional part of brain1.05e-1546
anterior neural tube1.85e-1540
regional part of forebrain5.07e-1539
forebrain5.07e-1539
future forebrain5.07e-1539
brain grey matter9.76e-1429
regional part of telencephalon9.76e-1429
telencephalon9.76e-1429
pre-chordal neural plate6.05e-1349
ecto-epithelium2.32e-1273
structure with developmental contribution from neural crest1.09e-0992
cerebral cortex1.14e-0921
cerebral hemisphere1.14e-0921
pallium1.14e-0921
organ system subdivision1.37e-08194
regional part of cerebral cortex1.02e-0717
intestine5.14e-0731







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