FFCP PHASE1:Hg19::chr15:55562656..55562664,-: Difference between revisions
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|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1909!1.13e-19!2 | |ontology_enrichment_disease=DOID:1909!1.13e-19!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.09e-44;2 | |ontology_enrichment_disease_v019=DOID:1909;1.09e-44;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.22e-44,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001782,5.61e-30,3;UBERON:0005424,5.61e-30,3;UBERON:0001781,8.96e-23,4;UBERON:0000966,1.52e-15,6;UBERON:0005388,1.52e-15,6;UBERON:0001802,1.52e-15,6;UBERON:0007625,6.35e-09,11;UBERON:0001003,8.09e-07,15;UBERON:0007376,8.09e-07,15;UBERON:0007383,8.09e-07,15 | |||
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|short_description=p14@RAB27A | |short_description=p14@RAB27A | ||
}} | }} |
Revision as of 08:51, 17 November 2012
Short description: | p14@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_RAB27A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -64bp_to_ENST00000396307, NM_004580_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | P51159A2RU94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 2.69e-76 | 14 |
melanocyte | 4.55e-55 | 10 |
melanoblast | 4.55e-55 | 10 |
visual pigment cell | 7.22e-50 | 4 |
retinal pigment epithelial cell | 5.61e-30 | 3 |
neurecto-epithelial cell | 9.40e-28 | 20 |
dark melanocyte | 1.67e-23 | 1 |
columnar/cuboidal epithelial cell | 1.20e-20 | 27 |
ecto-epithelial cell | 1.88e-16 | 34 |
migratory neural crest cell | 4.67e-13 | 41 |
neurectodermal cell | 2.98e-09 | 59 |
light melanocyte | 1.21e-08 | 3 |
ectodermal cell | 1.20e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 5.61e-30 | 3 |
presumptive retinal pigmented epithelium | 5.61e-30 | 3 |
layer of retina | 8.96e-23 | 4 |
retina | 1.52e-15 | 6 |
photoreceptor array | 1.52e-15 | 6 |
posterior segment of eyeball | 1.52e-15 | 6 |
pigment epithelium of eye | 6.35e-09 | 11 |
skin epidermis | 8.09e-07 | 15 |
outer epithelium | 8.09e-07 | 15 |
enveloping layer of ectoderm | 8.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.22e-44 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.