FFCP PHASE1:Hg19::chr3:87040259..87040277,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!3.37e-22!180;CL:0000057!9.42e-21!75;CL:0002620!3.82e-10!23;CL:0000680!2.16e-08!57;CL:0000056!2.16e-08!57;CL:0000355!2.16e-08!57;CL:0000136!9.38e-08!15;CL:0000187!2.09e-07!54;CL:0000183!4.93e-07!59 | |ontology_enrichment_celltype=CL:0000055!3.37e-22!180;CL:0000057!9.42e-21!75;CL:0002620!3.82e-10!23;CL:0000680!2.16e-08!57;CL:0000056!2.16e-08!57;CL:0000355!2.16e-08!57;CL:0000136!9.38e-08!15;CL:0000187!2.09e-07!54;CL:0000183!4.93e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.82e-11;23!CL:0000349;1.31e-09;19!CL:0000057;4.23e-09;73!CL:0000134;4.46e-08;55!CL:0000136;1.10e-07;13!CL:0000723;1.64e-07;61!CL:0002320;2.84e-07;188!CL:0000048;4.13e-07;58 | |ontology_enrichment_celltype_v019=CL:0002620;9.82e-11;23!CL:0000349;1.31e-09;19!CL:0000057;4.23e-09;73!CL:0000134;4.46e-08;55!CL:0000136;1.10e-07;13!CL:0000723;1.64e-07;61!CL:0002320;2.84e-07;188!CL:0000048;4.13e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.63e-23,76;CL:0002620,1.01e-10,23;CL:0000349,1.39e-09,19;CL:0000680,1.80e-08,58;CL:0000056,1.80e-08,58;CL:0000355,1.80e-08,58;CL:0000136,3.58e-08,15;CL:0000187,1.91e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.31e-14!95;UBERON:0000914!1.89e-12!83;UBERON:0002329!1.89e-12!83;UBERON:0003077!1.89e-12!83;UBERON:0003059!1.89e-12!83;UBERON:0007282!1.89e-12!83;UBERON:0009618!1.89e-12!83;UBERON:0007285!1.89e-12!83;UBERON:0000475!4.00e-12!365;UBERON:0004923!1.24e-11!57;UBERON:0000481!3.71e-11!347;UBERON:0000486!3.85e-11!82;UBERON:0005256!4.03e-11!143;UBERON:0003104!5.32e-11!238;UBERON:0009142!5.32e-11!238;UBERON:0002100!5.92e-11!216;UBERON:0004290!1.58e-10!70;UBERON:0000478!2.87e-10!24;UBERON:0000468!4.18e-10!659;UBERON:0002199!1.43e-09!45;UBERON:0002416!1.43e-09!45;UBERON:0002385!4.31e-09!63;UBERON:0001015!4.31e-09!63;UBERON:0000383!4.31e-09!63;UBERON:0005631!7.01e-09!14;UBERON:0000158!7.01e-09!14;UBERON:0001134!7.10e-09!61;UBERON:0002036!7.10e-09!61;UBERON:0003082!7.10e-09!61;UBERON:0004119!2.95e-08!169;UBERON:0000925!2.95e-08!169;UBERON:0006595!2.95e-08!169;UBERON:0002097!3.32e-08!40;UBERON:0000064!2.50e-07!219;UBERON:0000467!7.75e-07!625 | |ontology_enrichment_uberon=UBERON:0003102!1.31e-14!95;UBERON:0000914!1.89e-12!83;UBERON:0002329!1.89e-12!83;UBERON:0003077!1.89e-12!83;UBERON:0003059!1.89e-12!83;UBERON:0007282!1.89e-12!83;UBERON:0009618!1.89e-12!83;UBERON:0007285!1.89e-12!83;UBERON:0000475!4.00e-12!365;UBERON:0004923!1.24e-11!57;UBERON:0000481!3.71e-11!347;UBERON:0000486!3.85e-11!82;UBERON:0005256!4.03e-11!143;UBERON:0003104!5.32e-11!238;UBERON:0009142!5.32e-11!238;UBERON:0002100!5.92e-11!216;UBERON:0004290!1.58e-10!70;UBERON:0000478!2.87e-10!24;UBERON:0000468!4.18e-10!659;UBERON:0002199!1.43e-09!45;UBERON:0002416!1.43e-09!45;UBERON:0002385!4.31e-09!63;UBERON:0001015!4.31e-09!63;UBERON:0000383!4.31e-09!63;UBERON:0005631!7.01e-09!14;UBERON:0000158!7.01e-09!14;UBERON:0001134!7.10e-09!61;UBERON:0002036!7.10e-09!61;UBERON:0003082!7.10e-09!61;UBERON:0004119!2.95e-08!169;UBERON:0000925!2.95e-08!169;UBERON:0006595!2.95e-08!169;UBERON:0002097!3.32e-08!40;UBERON:0000064!2.50e-07!219;UBERON:0000467!7.75e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.72e-11;24!UBERON:0002384;8.57e-08;198!UBERON:0005631;1.26e-07;10!UBERON:0000158;1.26e-07;10!UBERON:0002199;7.19e-07;46!UBERON:0002416;7.19e-07;46!UBERON:0002097;8.77e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000478;7.72e-11;24!UBERON:0002384;8.57e-08;198!UBERON:0005631;1.26e-07;10!UBERON:0000158;1.26e-07;10!UBERON:0002199;7.19e-07;46!UBERON:0002416;7.19e-07;46!UBERON:0002097;8.77e-07;41 | ||
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| ||
|short_description=p1@VGLL3 | |short_description=p1@VGLL3 | ||
}} | }} |
Revision as of 13:22, 17 November 2012
Short description: | p1@VGLL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VGLL3_5end |
Coexpression cluster: | C1930_placenta_Fibroblast_amniotic_chorionic_bronchogenic_Hair_bone |
Association with transcript: | 0bp_to_ENST00000383698_5end |
EntrezGene: | VGLL3 |
HGNC: | 24327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.63e-23 | 76 |
skin fibroblast | 1.01e-10 | 23 |
extraembryonic cell | 1.39e-09 | 19 |
muscle precursor cell | 1.80e-08 | 58 |
myoblast | 1.80e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.80e-08 | 58 |
fat cell | 3.58e-08 | 15 |
muscle cell | 1.91e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.67e-13 | 99 |
organ component layer | 7.88e-13 | 66 |
multilaminar epithelium | 3.27e-11 | 83 |
extraembryonic structure | 7.42e-11 | 24 |
mesenchyme | 9.70e-11 | 160 |
entire embryonic mesenchyme | 9.70e-11 | 160 |
dense mesenchyme tissue | 9.78e-11 | 73 |
somite | 9.82e-11 | 71 |
presomitic mesoderm | 9.82e-11 | 71 |
presumptive segmental plate | 9.82e-11 | 71 |
dermomyotome | 9.82e-11 | 71 |
trunk paraxial mesoderm | 9.82e-11 | 71 |
paraxial mesoderm | 2.74e-10 | 72 |
presumptive paraxial mesoderm | 2.74e-10 | 72 |
trunk mesenchyme | 3.22e-10 | 122 |
integument | 6.50e-10 | 46 |
integumental system | 6.50e-10 | 46 |
epithelial vesicle | 2.08e-09 | 78 |
extraembryonic membrane | 2.25e-09 | 14 |
membranous layer | 2.25e-09 | 14 |
muscle tissue | 3.22e-09 | 64 |
musculature | 3.22e-09 | 64 |
musculature of body | 3.22e-09 | 64 |
trunk | 3.59e-09 | 199 |
skeletal muscle tissue | 5.50e-09 | 62 |
striated muscle tissue | 5.50e-09 | 62 |
myotome | 5.50e-09 | 62 |
endoderm-derived structure | 1.02e-08 | 160 |
endoderm | 1.02e-08 | 160 |
presumptive endoderm | 1.02e-08 | 160 |
skin of body | 1.82e-08 | 41 |
digestive system | 5.14e-07 | 145 |
digestive tract | 5.14e-07 | 145 |
primitive gut | 5.14e-07 | 145 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.