FFCP PHASE1:Hg19::chr1:159869912..159869966,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.82e-07;2 | |ontology_enrichment_development_v019=UBERON:0010122;4.82e-07;2 | ||
|ontology_enrichment_disease=DOID:305!5.00e-07!106 | |ontology_enrichment_disease=DOID:305!5.00e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.93e-18!115;UBERON:0001049!2.75e-08!57;UBERON:0005068!2.75e-08!57;UBERON:0006241!2.75e-08!57;UBERON:0007135!2.75e-08!57;UBERON:0005743!1.13e-07!86;UBERON:0001017!1.93e-07!82;UBERON:0002298!4.64e-07!8;UBERON:0000955!5.65e-07!69;UBERON:0006238!5.65e-07!69;UBERON:0002616!6.02e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!3.93e-18!115;UBERON:0001049!2.75e-08!57;UBERON:0005068!2.75e-08!57;UBERON:0006241!2.75e-08!57;UBERON:0007135!2.75e-08!57;UBERON:0005743!1.13e-07!86;UBERON:0001017!1.93e-07!82;UBERON:0002298!4.64e-07!8;UBERON:0000955!5.65e-07!69;UBERON:0006238!5.65e-07!69;UBERON:0002616!6.02e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.47e-12;6!UBERON:0000178;1.26e-10;15!UBERON:0000179;1.26e-10;15!UBERON:0000463;1.26e-10;15!UBERON:0001896;1.11e-09;3!UBERON:0005290;1.11e-09;3!UBERON:0000125;6.80e-08;9!UBERON:0002308;6.80e-08;9!UBERON:0000341;4.16e-07;2!UBERON:0000369;4.34e-07;4!UBERON:0002435;4.34e-07;4!UBERON:0000204;4.34e-07;4!UBERON:0001873;4.82e-07;2!UBERON:0003127;5.90e-07;2!UBERON:0002148;6.92e-07;2!UBERON:0006331;6.92e-07;2!UBERON:0009662;6.92e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002298;2.47e-12;6!UBERON:0000178;1.26e-10;15!UBERON:0000179;1.26e-10;15!UBERON:0000463;1.26e-10;15!UBERON:0001896;1.11e-09;3!UBERON:0005290;1.11e-09;3!UBERON:0000125;6.80e-08;9!UBERON:0002308;6.80e-08;9!UBERON:0000341;4.16e-07;2!UBERON:0000369;4.34e-07;4!UBERON:0002435;4.34e-07;4!UBERON:0000204;4.34e-07;4!UBERON:0001873;4.82e-07;2!UBERON:0003127;5.90e-07;2!UBERON:0002148;6.92e-07;2!UBERON:0006331;6.92e-07;2!UBERON:0009662;6.92e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.41e-21,114;UBERON:0002298,2.20e-12,6;UBERON:0000178,1.36e-10,15;UBERON:0000179,1.36e-10,15;UBERON:0000463,1.36e-10,15;UBERON:0001896,1.09e-09,3;UBERON:0005290,1.09e-09,3;UBERON:0010096,1.09e-09,3;UBERON:0000125,6.10e-08,9;UBERON:0002308,6.10e-08,9;UBERON:0001049,1.69e-07,56;UBERON:0005068,1.69e-07,56;UBERON:0006241,1.69e-07,56;UBERON:0007135,1.69e-07,56;UBERON:0000341,3.93e-07,2;UBERON:0000369,4.08e-07,4;UBERON:0002435,4.08e-07,4;UBERON:0000204,4.08e-07,4;UBERON:0010082,4.08e-07,4;UBERON:0001873,4.68e-07,2;UBERON:0010122,4.68e-07,2;UBERON:0003127,5.42e-07,2;UBERON:0000073,5.56e-07,53;UBERON:0002616,5.56e-07,53;UBERON:0002148,6.08e-07,2;UBERON:0006331,6.08e-07,2;UBERON:0009662,6.08e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.08371286321253,0,0,0,0,0,0,0,0,1.51907609501096,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3598657007667,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,3.93923419527467,4.61183850934277,3.02981840223312,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.23647103495506,0,0,0,0,5.07447609232169,2.29391162142713,3.98753031021914,4.04994018278241,2.05681136543097,4.53931317834902,3.24018862342869,4.75875105776562,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0.140669416410513,0,0,0,5.57894367102995,0.552567831062295,2.01546198283421,0,0,0,0,0,0,0.394573622547734,0,0,0,0.463840490809256,5.98841394003583,0.7812832832557,0.524759999977174,0,0.568967241427498,7.11910220819746,4.01859059005492,0,0,0.173624994933292,9.74315524395223,6.87399700164825,0,0,0,1.97446857438575,0,0.278847488557207,0.307801034015188,0,0.23056390438806,1.52587995496613,0.977826347298073,2.87101043758728,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,20.5673338280526,0,0,0,0.0884575645033392,0,0,0,0,10.5819778779663,0,1.87411556580271,0,0.978323094660449,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0.284609546029793,0,0.867798691675654,1.7638631534588,0,10.3088734262798,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,4.49768180290047,0.400794101257669,0,1.19885765749278,1.44090417154106,0,27.2836046600524,0,0,0.942776138467182,0,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0.279282401272254,0,0,2.79550600698588,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,2.04305109167363,0,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0.157611414598396,0.786818822024972,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,8.27410920713923,4.76037366273684,0,9.16259529011673,7.04796922946785,27.9823663077405,5.38510771951354,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,14.3352298922518,13.4224152359591,3.91207338530716,0.138348634936231,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0.450772826991655,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,2.6976274540513,0,0,0,0.504143392443436,0.138314504928436,0.322951291263702,0,0.490738592505128,0,0,0.231051332300676,0,0,0,6.76892955143315,0,0,0,0.655087670040387,0.591424344868181,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0.703484977438482,0.127762427639595,0.535701835878287,1.3451348888753,0,0.455324382702595,2.66107110487917,0,0,0.339848664884159,0,0,0.333694205676207,0,0.157115589916002,0.840816489941367,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,5.36906072629403,0,0,0,0,0,0,0.233939463462106,0,0,0,0.439762066981716,0,0,0.218559560503957,2.82190377816914,0,0,0,0,2.113278637917,0,0,0.128915775947154,0,1.60698544745092,0,0.401206833445841,0,0,0.143339583151451,0,0.135982980381829,1.30905207102113,0,0,0,0,0.252332849670158,0.109265571963696,0.253397002022874,0,0.26721740526556,0.18378979906969,0.50141507858475,18.5657810634687,31.8877314885852,4.1458471972939,2.99955687999496,7.46318936653433,10.9509638473321,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,41.8140457439303,3.99192427855216,0.0814032686109745,0,0,0,2.34640942403454,1.1001729976458,2.44137706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989443,0,0,0 | ||
|short_description=p3@CCDC19 | |short_description=p3@CCDC19 | ||
}} | }} |
Revision as of 23:33, 17 November 2012
Short description: | p3@CCDC19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CCDC19_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000368099, ENST00000476696_5end |
EntrezGene: | CCDC19 |
HGNC: | 17229 |
UniProt: | Q9UL16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.41e-21 | 114 |
brainstem | 2.20e-12 | 6 |
blood | 1.36e-10 | 15 |
haemolymphatic fluid | 1.36e-10 | 15 |
organism substance | 1.36e-10 | 15 |
medulla oblongata | 1.09e-09 | 3 |
myelencephalon | 1.09e-09 | 3 |
future myelencephalon | 1.09e-09 | 3 |
neural nucleus | 6.10e-08 | 9 |
nucleus of brain | 6.10e-08 | 9 |
neural tube | 1.69e-07 | 56 |
neural rod | 1.69e-07 | 56 |
future spinal cord | 1.69e-07 | 56 |
neural keel | 1.69e-07 | 56 |
throat | 3.93e-07 | 2 |
corpus striatum | 4.08e-07 | 4 |
striatum | 4.08e-07 | 4 |
ventral part of telencephalon | 4.08e-07 | 4 |
future corpus striatum | 4.08e-07 | 4 |
caudate nucleus | 4.68e-07 | 2 |
future caudate nucleus | 4.68e-07 | 2 |
open tracheal system trachea | 5.42e-07 | 2 |
regional part of nervous system | 5.56e-07 | 53 |
regional part of brain | 5.56e-07 | 53 |
locus ceruleus | 6.08e-07 | 2 |
brainstem nucleus | 6.08e-07 | 2 |
hindbrain nucleus | 6.08e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.