FFCP PHASE1:Hg19::chr12:119772527..119772541,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.14e-10!5;CL:0000039!4.69e-07!7;CL:0000586!4.69e-07!7 | |ontology_enrichment_celltype=CL:0002322!1.14e-10!5;CL:0000039!4.69e-07!7;CL:0000586!4.69e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.18e-08;5 | |ontology_enrichment_celltype_v019=CL:0002322;1.18e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.62e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.43e-14;3!UBERON:0009117;1.07e-11;10!UBERON:0005564;1.07e-11;10!UBERON:0010122;2.99e-10;2 | |ontology_enrichment_development_v019=UBERON:0003056;1.43e-14;3!UBERON:0009117;1.07e-11;10!UBERON:0005564;1.07e-11;10!UBERON:0010122;2.99e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.27e-38!115;UBERON:0005743!3.43e-16!86;UBERON:0000073!5.08e-15!94;UBERON:0001016!5.08e-15!94;UBERON:0003135!5.30e-15!11;UBERON:0001017!1.09e-14!82;UBERON:0003101!2.18e-13!22;UBERON:0000079!2.18e-13!22;UBERON:0000473!9.34e-13!8;UBERON:0002298!1.12e-12!8;UBERON:0001049!1.28e-12!57;UBERON:0005068!1.28e-12!57;UBERON:0006241!1.28e-12!57;UBERON:0007135!1.28e-12!57;UBERON:0000955!1.96e-12!69;UBERON:0006238!1.96e-12!69;UBERON:0000153!4.25e-12!129;UBERON:0007811!4.25e-12!129;UBERON:0003075!4.54e-11!86;UBERON:0007284!4.54e-11!86;UBERON:0002616!8.39e-11!59;UBERON:0002346!2.91e-10!90;UBERON:0001894!5.51e-10!7;UBERON:0006222!5.51e-10!7;UBERON:0000033!1.10e-09!123;UBERON:0004121!7.35e-09!169;UBERON:0000924!1.94e-08!173;UBERON:0006601!1.94e-08!173;UBERON:0000922!2.32e-08!612;UBERON:0002780!2.55e-08!41;UBERON:0001890!2.55e-08!41;UBERON:0006240!2.55e-08!41;UBERON:0002308!3.97e-08!9;UBERON:0000125!3.97e-08!9;UBERON:0003080!4.87e-08!42;UBERON:0003056!4.94e-08!61;UBERON:0001896!5.18e-08!3;UBERON:0005290!5.18e-08!3;UBERON:0010096!5.18e-08!3;UBERON:0005156!6.06e-08!59;UBERON:0000990!6.06e-08!59;UBERON:0004732!1.45e-07!13;UBERON:0006947!1.86e-07!3;UBERON:0004054!1.86e-07!3;UBERON:0000988!5.92e-07!3;UBERON:0006331!8.74e-07!3;UBERON:0000468!9.98e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!8.27e-38!115;UBERON:0005743!3.43e-16!86;UBERON:0000073!5.08e-15!94;UBERON:0001016!5.08e-15!94;UBERON:0003135!5.30e-15!11;UBERON:0001017!1.09e-14!82;UBERON:0003101!2.18e-13!22;UBERON:0000079!2.18e-13!22;UBERON:0000473!9.34e-13!8;UBERON:0002298!1.12e-12!8;UBERON:0001049!1.28e-12!57;UBERON:0005068!1.28e-12!57;UBERON:0006241!1.28e-12!57;UBERON:0007135!1.28e-12!57;UBERON:0000955!1.96e-12!69;UBERON:0006238!1.96e-12!69;UBERON:0000153!4.25e-12!129;UBERON:0007811!4.25e-12!129;UBERON:0003075!4.54e-11!86;UBERON:0007284!4.54e-11!86;UBERON:0002616!8.39e-11!59;UBERON:0002346!2.91e-10!90;UBERON:0001894!5.51e-10!7;UBERON:0006222!5.51e-10!7;UBERON:0000033!1.10e-09!123;UBERON:0004121!7.35e-09!169;UBERON:0000924!1.94e-08!173;UBERON:0006601!1.94e-08!173;UBERON:0000922!2.32e-08!612;UBERON:0002780!2.55e-08!41;UBERON:0001890!2.55e-08!41;UBERON:0006240!2.55e-08!41;UBERON:0002308!3.97e-08!9;UBERON:0000125!3.97e-08!9;UBERON:0003080!4.87e-08!42;UBERON:0003056!4.94e-08!61;UBERON:0001896!5.18e-08!3;UBERON:0005290!5.18e-08!3;UBERON:0010096!5.18e-08!3;UBERON:0005156!6.06e-08!59;UBERON:0000990!6.06e-08!59;UBERON:0004732!1.45e-07!13;UBERON:0006947!1.86e-07!3;UBERON:0004054!1.86e-07!3;UBERON:0000988!5.92e-07!3;UBERON:0006331!8.74e-07!3;UBERON:0000468!9.98e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.58e-15;3!UBERON:0005290;3.58e-15;3!UBERON:0003135;5.09e-15;11!UBERON:0002298;5.63e-13;6!UBERON:0003127;8.34e-11;2!UBERON:0001873;2.99e-10;2!UBERON:0000341;3.20e-10;2!UBERON:0005162;4.13e-10;2!UBERON:0000122;4.13e-10;2!UBERON:0000473;9.39e-10;8!UBERON:0003101;1.29e-09;22!UBERON:0000079;1.29e-09;22!UBERON:0000966;6.25e-09;5!UBERON:0005388;6.25e-09;5!UBERON:0001802;6.25e-09;5!UBERON:0004732;7.89e-09;13!UBERON:0006947;3.49e-07;3!UBERON:0004054;3.49e-07;3!UBERON:0005383;4.19e-07;3!UBERON:0005382;4.19e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001896;3.58e-15;3!UBERON:0005290;3.58e-15;3!UBERON:0003135;5.09e-15;11!UBERON:0002298;5.63e-13;6!UBERON:0003127;8.34e-11;2!UBERON:0001873;2.99e-10;2!UBERON:0000341;3.20e-10;2!UBERON:0005162;4.13e-10;2!UBERON:0000122;4.13e-10;2!UBERON:0000473;9.39e-10;8!UBERON:0003101;1.29e-09;22!UBERON:0000079;1.29e-09;22!UBERON:0000966;6.25e-09;5!UBERON:0005388;6.25e-09;5!UBERON:0001802;6.25e-09;5!UBERON:0004732;7.89e-09;13!UBERON:0006947;3.49e-07;3!UBERON:0004054;3.49e-07;3!UBERON:0005383;4.19e-07;3!UBERON:0005382;4.19e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.24e-23,114;UBERON:0001896,3.11e-15,3;UBERON:0005290,3.11e-15,3;UBERON:0010096,3.11e-15,3;UBERON:0003135,4.34e-15,11;UBERON:0002298,5.72e-13,6;UBERON:0000966,2.53e-12,6;UBERON:0005388,2.53e-12,6;UBERON:0001802,2.53e-12,6;UBERON:0003127,7.77e-11,2;UBERON:0001873,2.21e-10,2;UBERON:0010122,2.21e-10,2;UBERON:0000341,2.92e-10,2;UBERON:0005162,3.52e-10,2;UBERON:0000122,3.52e-10,2;UBERON:0000473,8.02e-10,8;UBERON:0003101,1.11e-09,22;UBERON:0000079,1.11e-09,22;UBERON:0004732,7.76e-09,13;UBERON:0003075,8.41e-08,82;UBERON:0007284,8.41e-08,82;UBERON:0002346,2.59e-07,86;UBERON:0005383,3.44e-07,3;UBERON:0005382,3.44e-07,3;UBERON:0006947,3.54e-07,3;UBERON:0004054,3.54e-07,3 | |||
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| ||
|short_description=p1@CCDC60 | |short_description=p1@CCDC60 | ||
}} | }} |
Revision as of 01:56, 18 November 2012
Short description: | p1@CCDC60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCDC60_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 10bp_to_ENST00000327554, ENST00000536742, NM_178499, uc001txe.2_5end |
EntrezGene: | CCDC60 |
HGNC: | 28610 |
UniProt: | Q8IWA6F5H2N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.62e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.24e-23 | 114 |
medulla oblongata | 3.11e-15 | 3 |
myelencephalon | 3.11e-15 | 3 |
future myelencephalon | 3.11e-15 | 3 |
male reproductive organ | 4.34e-15 | 11 |
brainstem | 5.72e-13 | 6 |
retina | 2.53e-12 | 6 |
photoreceptor array | 2.53e-12 | 6 |
posterior segment of eyeball | 2.53e-12 | 6 |
open tracheal system trachea | 7.77e-11 | 2 |
caudate nucleus | 2.21e-10 | 2 |
future caudate nucleus | 2.21e-10 | 2 |
throat | 2.92e-10 | 2 |
multi cell component structure | 3.52e-10 | 2 |
neuron projection bundle | 3.52e-10 | 2 |
testis | 8.02e-10 | 8 |
male organism | 1.11e-09 | 22 |
male reproductive system | 1.11e-09 | 22 |
segmental subdivision of nervous system | 7.76e-09 | 13 |
neural plate | 8.41e-08 | 82 |
presumptive neural plate | 8.41e-08 | 82 |
neurectoderm | 2.59e-07 | 86 |
caudate-putamen | 3.44e-07 | 3 |
dorsal striatum | 3.44e-07 | 3 |
male genital duct | 3.54e-07 | 3 |
internal male genitalia | 3.54e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.