FFCP PHASE1:Hg19::chr7:93690805..93690815,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002504!2.61e-20!3;CL:1000279!2.61e-20!3;CL:1000280!2.61e-20!3;CL:0002573!2.12e-09!2;CL:0002601!8.51e-08!1 | |ontology_enrichment_celltype=CL:0002504!2.61e-20!3;CL:1000279!2.61e-20!3;CL:1000280!2.61e-20!3;CL:0002573!2.12e-09!2;CL:0002601!8.51e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;2.05e-15;2!CL:0000137;2.05e-15;2!CL:0000092;2.05e-15;2!CL:0002582;9.90e-11;3!CL:0002552;6.04e-07;5 | |ontology_enrichment_celltype_v019=CL:0000054;2.05e-15;2!CL:0000137;2.05e-15;2!CL:0000092;2.05e-15;2!CL:0002582;9.90e-11;3!CL:0002552;6.04e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.05e-15,2;CL:0000137,2.05e-15,2;CL:0000092,2.05e-15,2;CL:0002582,8.99e-11,3;CL:0002552,6.77e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.01e-36!14;DOID:120!1.38e-22!27;DOID:193!6.56e-21!29;DOID:0060085!3.55e-08!1;DOID:3165!3.55e-08!1;DOID:0060121!3.55e-08!1;DOID:2438!3.55e-08!1;DOID:4418!3.55e-08!1 | |ontology_enrichment_disease=DOID:2394!1.01e-36!14;DOID:120!1.38e-22!27;DOID:193!6.56e-21!29;DOID:0060085!3.55e-08!1;DOID:3165!3.55e-08!1;DOID:0060121!3.55e-08!1;DOID:2438!3.55e-08!1;DOID:4418!3.55e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;2.37e-29;1!DOID:3165;2.37e-29;1!DOID:0060121;2.37e-29;1!DOID:2438;2.37e-29;1!DOID:4418;2.37e-29;1!DOID:200;2.05e-15;2!DOID:4305;2.05e-15;2!DOID:4556;6.73e-11;3!DOID:2394;4.21e-09;14!DOID:0060072;2.26e-08;4!DOID:3908;4.79e-07;5 | |ontology_enrichment_disease_v019=DOID:0060085;2.37e-29;1!DOID:3165;2.37e-29;1!DOID:0060121;2.37e-29;1!DOID:2438;2.37e-29;1!DOID:4418;2.37e-29;1!DOID:200;2.05e-15;2!DOID:4305;2.05e-15;2!DOID:4556;6.73e-11;3!DOID:2394;4.21e-09;14!DOID:0060072;2.26e-08;4!DOID:3908;4.79e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.37e-29,1;DOID:3165,2.37e-29,1;DOID:0060121,2.37e-29,1;DOID:2438,2.37e-29,1;DOID:4418,2.37e-29,1;DOID:200,2.05e-15,2;DOID:4305,2.05e-15,2;DOID:4556,6.73e-11,3;DOID:2394,4.38e-09,14;DOID:0060072,2.26e-08,4;DOID:3908,4.79e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000992!1.44e-31!13;UBERON:0002119!3.19e-27!4;UBERON:0004531!3.19e-27!4;UBERON:0002118!2.95e-21!5;UBERON:0004532!2.95e-21!5;UBERON:0000991!4.10e-19!21;UBERON:0009196!4.10e-19!21;UBERON:0009117!4.10e-19!21;UBERON:0005564!4.10e-19!21;UBERON:0004176!3.42e-18!22;UBERON:0003134!4.65e-16!37;UBERON:0000474!4.65e-16!37;UBERON:0003100!2.53e-14!41;UBERON:0003133!5.57e-12!48;UBERON:0005156!2.10e-11!59;UBERON:0000990!2.10e-11!59;UBERON:0003886!1.08e-08!63;UBERON:0002323!4.31e-08!46;UBERON:0002553!1.18e-07!70;UBERON:0004458!1.59e-07!49;UBERON:0001155!4.23e-07!9 | |ontology_enrichment_uberon=UBERON:0000992!1.44e-31!13;UBERON:0002119!3.19e-27!4;UBERON:0004531!3.19e-27!4;UBERON:0002118!2.95e-21!5;UBERON:0004532!2.95e-21!5;UBERON:0000991!4.10e-19!21;UBERON:0009196!4.10e-19!21;UBERON:0009117!4.10e-19!21;UBERON:0005564!4.10e-19!21;UBERON:0004176!3.42e-18!22;UBERON:0003134!4.65e-16!37;UBERON:0000474!4.65e-16!37;UBERON:0003100!2.53e-14!41;UBERON:0003133!5.57e-12!48;UBERON:0005156!2.10e-11!59;UBERON:0000990!2.10e-11!59;UBERON:0003886!1.08e-08!63;UBERON:0002323!4.31e-08!46;UBERON:0002553!1.18e-07!70;UBERON:0004458!1.59e-07!49;UBERON:0001155!4.23e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;3.16e-29;4!UBERON:0000992;9.94e-10;13!UBERON:0000014;2.26e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002119;3.16e-29;4!UBERON:0000992;9.94e-10;13!UBERON:0000014;2.26e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,3.65e-29,4;UBERON:0000992,1.04e-09,13;UBERON:0000014,2.26e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30289614398828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27437413730962,0.449803112163605,0.621051827505038,3.31764966272684,0.265841714557995,0,0,0,0.813741466409323,0.363697318405119,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39100228192093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30289614398828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27437413730962,0.449803112163605,0.621051827505038,3.31764966272684,0.265841714557995,0,0,0,0.813741466409323,0.363697318405119,0.322231671127465,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:93690805..93690815,+ | |short_description=p@chr7:93690805..93690815,+ | ||
}} | }} |
Revision as of 08:33, 18 November 2012
Short description: | p@chr7:93690805..93690815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:93690805..93690815, + |
Coexpression cluster: | C2908_squamous_fibrous_large_mesenchymal_giant_Renal_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.05e-15 | 2 |
osteocyte | 2.05e-15 | 2 |
osteoclast | 2.05e-15 | 2 |
visceral preadipocyte | 8.99e-11 | 3 |
fibroblast of gingiva | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
left ovary | 3.65e-29 | 4 |
female gonad | 1.04e-09 | 13 |
zone of skin | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.37e-29 | 1 |
skin benign neoplasm | 2.37e-29 | 1 |
integumentary system benign neoplasm | 2.37e-29 | 1 |
dermis tumor | 2.37e-29 | 1 |
cutaneous fibrous histiocytoma | 2.37e-29 | 1 |
giant cell tumor | 2.05e-15 | 2 |
bone giant cell tumor | 2.05e-15 | 2 |
lung large cell carcinoma | 6.73e-11 | 3 |
ovarian cancer | 4.38e-09 | 14 |
benign neoplasm | 2.26e-08 | 4 |
non-small cell lung carcinoma | 4.79e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.