FFCP PHASE1:Hg19::chr7:65338230..65338293,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!4.32e-12!248;CL:0000220!6.08e-12!246;CL:0000222!9.73e-12!119;CL:0002139!1.80e-09!24;CL:0000066!1.93e-09!254;CL:0000213!2.41e-09!57;CL:0000215!2.41e-09!57;CL:0002078!2.50e-09!44;CL:0000115!7.52e-09!35;CL:0000071!1.99e-08!18;CL:0002546!1.99e-08!18;CL:0000136!2.89e-08!15;CL:0000325!2.00e-07!39 | |ontology_enrichment_celltype=CL:0002321!4.32e-12!248;CL:0000220!6.08e-12!246;CL:0000222!9.73e-12!119;CL:0002139!1.80e-09!24;CL:0000066!1.93e-09!254;CL:0000213!2.41e-09!57;CL:0000215!2.41e-09!57;CL:0002078!2.50e-09!44;CL:0000115!7.52e-09!35;CL:0000071!1.99e-08!18;CL:0002546!1.99e-08!18;CL:0000136!2.89e-08!15;CL:0000325!2.00e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.11e-09;13!CL:0002139;3.54e-09;24!CL:0000071;2.47e-08;18!CL:0000115;1.90e-07;36 | |ontology_enrichment_celltype_v019=CL:0000136;1.11e-09;13!CL:0002139;3.54e-09;24!CL:0000071;2.47e-08;18!CL:0000115;1.90e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.94e-12,250;CL:0000222,2.08e-11,121;CL:0000066,1.47e-09,253;CL:0002139,1.71e-09,24;CL:0000213,1.78e-09,58;CL:0000215,1.78e-09,58;CL:0002078,1.89e-09,45;CL:0000115,5.83e-09,36;CL:0000071,1.91e-08,18;CL:0002546,1.91e-08,18;CL:0000136,2.77e-08,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.47e-08;18 | |ontology_enrichment_development_v019=CL:0002546;2.47e-08;18 | ||
|ontology_enrichment_disease=DOID:162!4.85e-10!235;DOID:14566!2.80e-09!239 | |ontology_enrichment_disease=DOID:162!4.85e-10!235;DOID:14566!2.80e-09!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,6.43e-10,235;DOID:14566,3.67e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.27e-13!69;UBERON:0003914!2.63e-12!118;UBERON:0002049!3.30e-12!79;UBERON:0007798!3.30e-12!79;UBERON:0001981!6.83e-11!60;UBERON:0007500!6.83e-11!60;UBERON:0004537!6.83e-11!60;UBERON:0006965!6.83e-11!60;UBERON:0002100!2.33e-10!216;UBERON:0000490!3.45e-10!138;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001986!1.99e-08!18;UBERON:0004638!1.99e-08!18;UBERON:0004852!1.99e-08!18;UBERON:0006914!3.05e-08!25;UBERON:0004872!4.14e-08!84;UBERON:0000477!5.46e-08!286;UBERON:0000487!5.71e-08!22;UBERON:0000119!1.03e-07!312;UBERON:0004111!1.60e-07!241;UBERON:0000483!2.04e-07!309;UBERON:0005256!2.10e-07!143;UBERON:0009569!3.58e-07!113;UBERON:0001009!3.74e-07!113;UBERON:0001637!6.43e-07!42;UBERON:0003509!6.43e-07!42;UBERON:0004572!6.43e-07!42 | |ontology_enrichment_uberon=UBERON:0000055!7.27e-13!69;UBERON:0003914!2.63e-12!118;UBERON:0002049!3.30e-12!79;UBERON:0007798!3.30e-12!79;UBERON:0001981!6.83e-11!60;UBERON:0007500!6.83e-11!60;UBERON:0004537!6.83e-11!60;UBERON:0006965!6.83e-11!60;UBERON:0002100!2.33e-10!216;UBERON:0000490!3.45e-10!138;UBERON:0003104!1.29e-08!238;UBERON:0009142!1.29e-08!238;UBERON:0001986!1.99e-08!18;UBERON:0004638!1.99e-08!18;UBERON:0004852!1.99e-08!18;UBERON:0006914!3.05e-08!25;UBERON:0004872!4.14e-08!84;UBERON:0000477!5.46e-08!286;UBERON:0000487!5.71e-08!22;UBERON:0000119!1.03e-07!312;UBERON:0004111!1.60e-07!241;UBERON:0000483!2.04e-07!309;UBERON:0005256!2.10e-07!143;UBERON:0009569!3.58e-07!113;UBERON:0001009!3.74e-07!113;UBERON:0001637!6.43e-07!42;UBERON:0003509!6.43e-07!42;UBERON:0004572!6.43e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.47e-08;18!UBERON:0001986;2.47e-08;18!UBERON:0004852;2.47e-08;18!UBERON:0006914;2.55e-08;25!UBERON:0000487;5.67e-08;22!UBERON:0000490;1.56e-07;33!UBERON:0000055;3.81e-07;65!UBERON:0003914;4.80e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.47e-08;18!UBERON:0001986;2.47e-08;18!UBERON:0004852;2.47e-08;18!UBERON:0006914;2.55e-08;25!UBERON:0000487;5.67e-08;22!UBERON:0000490;1.56e-07;33!UBERON:0000055;3.81e-07;65!UBERON:0003914;4.80e-07;74 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.85e-13,117;UBERON:0000055,1.03e-12,68;UBERON:0002049,4.70e-12,78;UBERON:0007798,4.70e-12,78;UBERON:0002100,6.50e-11,199;UBERON:0000490,6.69e-11,148;UBERON:0007500,9.75e-11,59;UBERON:0001981,9.75e-11,59;UBERON:0004537,9.75e-11,59;UBERON:0006965,9.75e-11,59;UBERON:0004638,1.91e-08,18;UBERON:0001986,1.91e-08,18;UBERON:0004852,1.91e-08,18;UBERON:0006914,2.93e-08,25;UBERON:0004872,4.64e-08,83;UBERON:0000487,5.49e-08,22;UBERON:0004111,1.43e-07,240;UBERON:0000119,1.43e-07,309;UBERON:0009569,2.57e-07,112;UBERON:0000483,2.83e-07,306;UBERON:0001009,5.22e-07,112;UBERON:0001637,5.52e-07,42;UBERON:0003509,5.52e-07,42;UBERON:0004572,5.52e-07,42;UBERON:0005256,8.16e-07,122 | |||
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| ||
|short_description=p1@VKORC1L1 | |short_description=p1@VKORC1L1 | ||
}} | }} |
Revision as of 01:40, 19 November 2012
Short description: | p1@VKORC1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VKORC1L1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000360768, NM_173517, uc003tul.2, uc011kds.1_5end |
EntrezGene: | VKORC1L1 |
HGNC: | 21492 |
UniProt: | Q8N0U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.94e-12 | 250 |
mesodermal cell | 2.08e-11 | 121 |
epithelial cell | 1.47e-09 | 253 |
endothelial cell of vascular tree | 1.71e-09 | 24 |
lining cell | 1.78e-09 | 58 |
barrier cell | 1.78e-09 | 58 |
meso-epithelial cell | 1.89e-09 | 45 |
endothelial cell | 5.83e-09 | 36 |
blood vessel endothelial cell | 1.91e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-08 | 18 |
fat cell | 2.77e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.85e-13 | 117 |
vessel | 1.03e-12 | 68 |
vasculature | 4.70e-12 | 78 |
vascular system | 4.70e-12 | 78 |
trunk | 6.50e-11 | 199 |
unilaminar epithelium | 6.69e-11 | 148 |
epithelial tube open at both ends | 9.75e-11 | 59 |
blood vessel | 9.75e-11 | 59 |
blood vasculature | 9.75e-11 | 59 |
vascular cord | 9.75e-11 | 59 |
blood vessel endothelium | 1.91e-08 | 18 |
endothelium | 1.91e-08 | 18 |
cardiovascular system endothelium | 1.91e-08 | 18 |
squamous epithelium | 2.93e-08 | 25 |
splanchnic layer of lateral plate mesoderm | 4.64e-08 | 83 |
simple squamous epithelium | 5.49e-08 | 22 |
anatomical conduit | 1.43e-07 | 240 |
cell layer | 1.43e-07 | 309 |
subdivision of trunk | 2.57e-07 | 112 |
epithelium | 2.83e-07 | 306 |
circulatory system | 5.22e-07 | 112 |
artery | 5.52e-07 | 42 |
arterial blood vessel | 5.52e-07 | 42 |
arterial system | 5.52e-07 | 42 |
trunk mesenchyme | 8.16e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.43e-10 | 235 |
disease of cellular proliferation | 3.67e-09 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.