FFCP PHASE1:Hg19::chr7:22259867..22259876,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!9.16e-20!24;CL:0000115!5.43e-13!35;CL:0000071!4.44e-12!18;CL:0002546!4.44e-12!18;CL:0005020!4.64e-10!6;CL:0002138!4.64e-10!6;CL:0005022!4.64e-10!6;CL:0002543!2.29e-09!6;CL:0002078!3.58e-09!44 | |ontology_enrichment_celltype=CL:0002139!9.16e-20!24;CL:0000115!5.43e-13!35;CL:0000071!4.44e-12!18;CL:0002546!4.44e-12!18;CL:0005020!4.64e-10!6;CL:0002138!4.64e-10!6;CL:0005022!4.64e-10!6;CL:0002543!2.29e-09!6;CL:0002078!3.58e-09!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;6.89e-09;6!CL:0002139;1.19e-07;24 | |ontology_enrichment_celltype_v019=CL:0002138;6.89e-09;6!CL:0002139;1.19e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,5.73e-09,6;CL:0002138,5.73e-09,6;CL:0005022,5.73e-09,6;CL:0002139,9.99e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.51e-12;2!CL:0005022;6.89e-09;6!UBERON:0004872;1.25e-07;7!UBERON:0000358;3.93e-07;1!UBERON:0004140;3.93e-07;1 | |ontology_enrichment_development_v019=UBERON:0007297;9.51e-12;2!CL:0005022;6.89e-09;6!UBERON:0004872;1.25e-07;7!UBERON:0000358;3.93e-07;1!UBERON:0004140;3.93e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p13@RAPGEF5 | |short_description=p13@RAPGEF5 | ||
}} | }} |
Revision as of 15:01, 19 November 2012
Short description: | p13@RAPGEF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_RAPGEF5_5end |
Coexpression cluster: | C1887_lung_Endothelial_adipose_heart_spleen_Hepatocyte_penis |
Association with transcript: | -10bp_to_ENST00000420196_5end |
EntrezGene: | RAPGEF5 |
HGNC: | 16862 |
UniProt: | C9JHM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 5.73e-09 | 6 |
endothelial cell of lymphatic vessel | 5.73e-09 | 6 |
vascular lymphangioblast | 5.73e-09 | 6 |
endothelial cell of vascular tree | 9.99e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 4.46e-09 | 10 |
adult organism | 9.45e-09 | 114 |
valve | 1.70e-08 | 3 |
cardiac mesenchyme | 1.70e-08 | 3 |
cardial valve | 1.70e-08 | 3 |
tunica intima | 1.70e-08 | 3 |
heart layer | 1.70e-08 | 3 |
endocardium | 1.70e-08 | 3 |
endocardial cushion | 1.70e-08 | 3 |
presumptive endocardium | 1.70e-08 | 3 |
spleen | 1.83e-08 | 3 |
gastrointestinal system mesentery | 1.83e-08 | 3 |
stomach region | 1.83e-08 | 3 |
mesentery | 1.83e-08 | 3 |
gastrointestinal system serosa | 1.83e-08 | 3 |
mesentery of stomach | 1.83e-08 | 3 |
gut mesentery | 1.83e-08 | 3 |
dorsal mesentery | 1.83e-08 | 3 |
dorsal mesogastrium | 1.83e-08 | 3 |
peritoneal cavity | 1.83e-08 | 3 |
spleen primordium | 1.83e-08 | 3 |
male genital duct | 4.72e-08 | 3 |
internal male genitalia | 4.72e-08 | 3 |
intraembryonic coelom | 1.81e-07 | 12 |
mitral valve | 3.73e-07 | 1 |
lower lobe of right lung | 4.43e-07 | 1 |
right lung lobe | 4.43e-07 | 1 |
lower lobe of lung | 4.43e-07 | 1 |
lobe of lung | 4.43e-07 | 1 |
right lung | 4.43e-07 | 1 |
anatomical conduit | 5.29e-07 | 240 |
pulmonary valve | 7.82e-07 | 1 |
semi-lunar valve | 7.82e-07 | 1 |
lymphatic vessel | 7.91e-07 | 8 |
lymph vasculature | 7.91e-07 | 8 |
lymphatic part of lymphoid system | 7.91e-07 | 8 |
lymph node | 9.25e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.