FFCP PHASE1:Hg19::chr12:114843628..114843639,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002620!3.45e-12!23;CL:0002617!6.72e-08!2;CL:0000057!2.54e-07!75 | |ontology_enrichment_celltype=CL:0002620!3.45e-12!23;CL:0002617!6.72e-08!2;CL:0000057!2.54e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.08e-16;1!CL:0002600;7.21e-09;2 | |ontology_enrichment_celltype_v019=CL:0002591;2.08e-16;1!CL:0002600;7.21e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.25e-16,1;CL:0002600,6.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.12e-16;1!UBERON:0004140;1.12e-16;1!UBERON:0005062;1.79e-16;4!UBERON:0007284;1.79e-16;4!UBERON:0010226;2.08e-16;1 | |ontology_enrichment_development_v019=UBERON:0000358;1.12e-16;1!UBERON:0004140;1.12e-16;1!UBERON:0005062;1.79e-16;4!UBERON:0007284;1.79e-16;4!UBERON:0010226;2.08e-16;1 | ||
|ontology_enrichment_disease=DOID:17!5.76e-11!5;DOID:450!5.76e-11!5;DOID:66!5.76e-11!5;DOID:423!5.76e-11!5;DOID:0080000!5.76e-11!5;DOID:11722!5.76e-11!5;DOID:114!1.61e-08!2 | |ontology_enrichment_disease=DOID:17!5.76e-11!5;DOID:450!5.76e-11!5;DOID:66!5.76e-11!5;DOID:423!5.76e-11!5;DOID:0080000!5.76e-11!5;DOID:11722!5.76e-11!5;DOID:114!1.61e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:114;3.92e-32;2!DOID:178;6.47e-17;1!DOID:326;6.47e-17;1!DOID:3978;6.47e-17;1!DOID:3394;6.47e-17;1!DOID:5844;6.47e-17;1!DOID:1287;1.31e-16;4!DOID:6193;2.08e-16;1!DOID:3350;7.21e-09;2 | |ontology_enrichment_disease_v019=DOID:114;3.92e-32;2!DOID:178;6.47e-17;1!DOID:326;6.47e-17;1!DOID:3978;6.47e-17;1!DOID:3394;6.47e-17;1!DOID:5844;6.47e-17;1!DOID:1287;1.31e-16;4!DOID:6193;2.08e-16;1!DOID:3350;7.21e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,3.92e-32,2;DOID:178,6.47e-17,1;DOID:326,6.47e-17,1;DOID:3978,6.47e-17,1;DOID:3394,6.47e-17,1;DOID:5844,6.47e-17,1;DOID:1287,1.31e-16,4;DOID:6193,3.07e-16,1;DOID:3350,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.16e-16!27;UBERON:0003978!1.12e-11!3;UBERON:0009751!1.12e-11!3;UBERON:0000946!1.12e-11!3;UBERON:0002523!1.12e-11!3;UBERON:0005983!1.12e-11!3;UBERON:0002165!1.12e-11!3;UBERON:0002062!1.12e-11!3;UBERON:0007280!1.12e-11!3;UBERON:0004151!2.09e-11!3;UBERON:0000948!1.87e-10!24;UBERON:0005498!1.87e-10!24;UBERON:0004140!1.87e-10!24;UBERON:0009881!1.87e-10!24;UBERON:0004141!1.87e-10!24;UBERON:0003084!1.87e-10!24;UBERON:0007005!1.87e-10!24;UBERON:0004139!1.87e-10!24;UBERON:0004291!1.87e-10!24;UBERON:0002133!2.94e-08!2;UBERON:0002081!4.46e-08!2;UBERON:0003103!5.57e-08!69;UBERON:0002097!1.60e-07!40 | |ontology_enrichment_uberon=UBERON:0007100!1.16e-16!27;UBERON:0003978!1.12e-11!3;UBERON:0009751!1.12e-11!3;UBERON:0000946!1.12e-11!3;UBERON:0002523!1.12e-11!3;UBERON:0005983!1.12e-11!3;UBERON:0002165!1.12e-11!3;UBERON:0002062!1.12e-11!3;UBERON:0007280!1.12e-11!3;UBERON:0004151!2.09e-11!3;UBERON:0000948!1.87e-10!24;UBERON:0005498!1.87e-10!24;UBERON:0004140!1.87e-10!24;UBERON:0009881!1.87e-10!24;UBERON:0004141!1.87e-10!24;UBERON:0003084!1.87e-10!24;UBERON:0007005!1.87e-10!24;UBERON:0004139!1.87e-10!24;UBERON:0004291!1.87e-10!24;UBERON:0002133!2.94e-08!2;UBERON:0002081!4.46e-08!2;UBERON:0003103!5.57e-08!69;UBERON:0002097!1.60e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.26e-38;25!UBERON:0003978;1.29e-21;3!UBERON:0000946;1.29e-21;3!UBERON:0000948;2.14e-17;22!UBERON:0002146;6.47e-17;1!UBERON:0005623;6.47e-17;1!UBERON:0002135;8.85e-17;1!UBERON:0002084;2.08e-16;1!UBERON:0002082;2.08e-16;1!UBERON:0010313;1.90e-14;10!UBERON:0002133;4.70e-09;2!UBERON:0003103;6.52e-09;61!UBERON:0000078;7.21e-09;2!UBERON:0002012;7.21e-09;2!UBERON:0008886;7.21e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.26e-38;25!UBERON:0003978;1.29e-21;3!UBERON:0000946;1.29e-21;3!UBERON:0000948;2.14e-17;22!UBERON:0002146;6.47e-17;1!UBERON:0005623;6.47e-17;1!UBERON:0002135;8.85e-17;1!UBERON:0002084;2.08e-16;1!UBERON:0002082;2.08e-16;1!UBERON:0010313;1.90e-14;10!UBERON:0002133;4.70e-09;2!UBERON:0003103;6.52e-09;61!UBERON:0000078;7.21e-09;2!UBERON:0002012;7.21e-09;2!UBERON:0008886;7.21e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.40e-45,27;UBERON:0000948,1.20e-22,24;UBERON:0005498,1.20e-22,24;UBERON:0004140,1.20e-22,24;UBERON:0009881,1.20e-22,24;UBERON:0004141,1.20e-22,24;UBERON:0003084,1.20e-22,24;UBERON:0007005,1.20e-22,24;UBERON:0004139,1.20e-22,24;UBERON:0004291,1.20e-22,24;UBERON:0003978,1.17e-21,3;UBERON:0009751,1.17e-21,3;UBERON:0000946,1.17e-21,3;UBERON:0002523,1.17e-21,3;UBERON:0005983,1.17e-21,3;UBERON:0002165,1.17e-21,3;UBERON:0002062,1.17e-21,3;UBERON:0007280,1.17e-21,3;UBERON:0003103,1.28e-21,68;UBERON:0002146,5.53e-17,1;UBERON:0005623,5.53e-17,1;UBERON:0002135,8.86e-17,1;UBERON:0002084,1.41e-16,1;UBERON:0002082,1.41e-16,1;UBERON:0010226,1.41e-16,1;UBERON:0010313,1.85e-14,10;UBERON:0002342,1.85e-14,10;UBERON:0005062,1.85e-14,10;UBERON:0001009,2.56e-10,112;UBERON:0004797,7.64e-10,7;UBERON:0002133,4.70e-09,2;UBERON:0000078,7.49e-09,2;UBERON:0007497,7.49e-09,2;UBERON:0003643,7.49e-09,2;UBERON:0003504,7.49e-09,2;UBERON:0003469,7.49e-09,2;UBERON:0003496,7.49e-09,2;UBERON:0002012,7.49e-09,2;UBERON:0008886,7.49e-09,2;UBERON:0007303,7.49e-09,2;UBERON:0002061,7.49e-09,2;UBERON:0005432,7.49e-09,2;UBERON:0004363,7.49e-09,2 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,4.81236890424536,0.717873024576814,4.79229601197579,11.5891032996874,4.68660060627932,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93458368795583,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |phase1_expression=0.363356758541113,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0319161948297,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6306712165393,4.81236890424536,0.717873024576814,4.79229601197579,11.5891032996874,4.68660060627932,2.48578848200887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93458368795583,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | ||
|short_description=p9@TBX5 | |short_description=p9@TBX5 | ||
}} | }} |
Revision as of 16:22, 20 November 2012
Short description: | p9@TBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TBX5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 249bp_to_ENST00000405440, NM_181486, uc001tvo.2_5end |
EntrezGene: | TBX5 |
HGNC: | 11604 |
UniProt: | Q99593 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.25e-16 | 1 |
smooth muscle cell of trachea | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.92e-32 | 2 |
vascular disease | 6.47e-17 | 1 |
ischemia | 6.47e-17 | 1 |
extrinsic cardiomyopathy | 6.47e-17 | 1 |
myocardial ischemia | 6.47e-17 | 1 |
myocardial infarction | 6.47e-17 | 1 |
cardiovascular system disease | 1.31e-16 | 4 |
epithelioid sarcoma | 3.07e-16 | 1 |
mesenchymal cell neoplasm | 8.74e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.