FFCP PHASE1:Hg19::chr11:116694009..116694029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=W | |||
|UniProt=P06727 | |UniProt=P06727 | ||
|association_with_transcript=0bp_to_ENST00000357780,NM_000482,uc001pps.1_5end | |association_with_transcript=0bp_to_ENST00000357780,NM_000482,uc001pps.1_5end | ||
Revision as of 08:57, 6 July 2013
| Short description: | p1@APOA4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_APOA4_5end |
| Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
| Association with transcript: | 0bp_to_ENST00000357780, NM_000482, uc001pps.1_5end |
| EntrezGene: | APOA4 |
| HGNC: | 602 |
| UniProt: | P06727 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@APOA4 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 9.81e-19 | 12 |
| embryonic stem cell | 1.84e-12 | 5 |
| endodermal cell | 1.52e-07 | 58 |
| intestinal epithelial cell | 2.00e-07 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| liver | 1.07e-20 | 19 |
| digestive gland | 1.07e-20 | 19 |
| liver bud | 1.07e-20 | 19 |
| hepatic diverticulum | 1.00e-17 | 22 |
| liver primordium | 1.00e-17 | 22 |
| intestine | 1.53e-17 | 17 |
| digestive tract diverticulum | 6.63e-17 | 23 |
| epithelial sac | 1.84e-15 | 25 |
| epithelium of foregut-midgut junction | 1.84e-15 | 25 |
| anatomical boundary | 1.84e-15 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| vascular disease | 1.26e-07 | 1 |
| ischemia | 1.26e-07 | 1 |
| extrinsic cardiomyopathy | 1.26e-07 | 1 |
| myocardial ischemia | 1.26e-07 | 1 |
| myocardial infarction | 1.26e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
