FFCP PHASE1:Hg19::chr12:114404090..114404099,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9904 | |EntrezGene=9904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29098 | |HGNC=29098 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000545145_5end | |association_with_transcript=11bp_to_ENST00000545145_5end |
Revision as of 14:22, 6 July 2013
Short description: | p2@RBM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RBM19_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 11bp_to_ENST00000545145_5end |
EntrezGene: | RBM19 |
HGNC: | 29098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RBM19 |
---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.17e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.17e-16 | 2 |
Langerhans cell | 9.58e-15 | 5 |
multinucleate cell | 4.19e-09 | 1 |
myotube | 4.19e-09 | 1 |
conventional dendritic cell | 2.04e-08 | 8 |
hematopoietic cell | 4.03e-08 | 177 |
dendritic cell | 5.76e-07 | 10 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.25e-07 | 10 |
blastocyst | 1.25e-07 | 10 |
blastula | 1.25e-07 | 10 |
bilaminar disc | 1.25e-07 | 10 |
inner cell mass | 1.25e-07 | 10 |
cleaving embryo | 1.25e-07 | 10 |
connecting stalk | 1.25e-07 | 10 |
inner cell mass derived epiblast | 1.25e-07 | 10 |
extraembryonic mesoderm | 1.25e-07 | 10 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.74e-09 | 1 |
cutaneous T cell lymphoma | 1.74e-09 | 1 |
mycosis fungoides | 1.74e-09 | 1 |
hematologic cancer | 1.36e-08 | 51 |
immune system cancer | 1.36e-08 | 51 |
Showing 1 to 5 of 5 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.