FFCP PHASE1:Hg19::chr10:3442892..3442893,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:3442892..3442893,+|id=chr10:3442892..3442893,+|ontology_enrichment_celltype=CL:0001024!2.69e-08!1;CL:0000342!5.82e-08!1;CL:0002565!5.82e-08!1|ontology_enrichment_celltype_v019=CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!8.25e-35!22;UBERON:0001869!4.19e-33!32;UBERON:0001950!1.73e-31!20;UBERON:0001893!4.49e-31!34;UBERON:0000956!1.42e-30!25;UBERON:0000203!1.42e-30!25;UBERON:0002791!3.12e-27!33;UBERON:0002020!2.16e-26!34;UBERON:0003528!2.16e-26!34;UBERON:0002780!1.72e-25!41;UBERON:0001890!1.72e-25!41;UBERON:0006240!1.72e-25!41;UBERON:0003080!7.68e-25!42;UBERON:0003056!3.48e-19!61;UBERON:0000200!4.53e-19!6;UBERON:0001017!4.06e-18!82;UBERON:0001049!8.76e-18!57;UBERON:0005068!8.76e-18!57;UBERON:0006241!8.76e-18!57;UBERON:0007135!8.76e-18!57;UBERON:0005743!3.75e-17!86;UBERON:0002616!4.14e-17!59;UBERON:0000955!1.53e-16!69;UBERON:0006238!1.53e-16!69;UBERON:0000073!2.86e-15!94;UBERON:0001016!2.86e-15!94;UBERON:0001871!2.53e-14!7;UBERON:0002346!3.90e-14!90;UBERON:0007023!4.09e-14!115;UBERON:0000349!3.16e-13!5;UBERON:0001872!4.58e-13!5;UBERON:0003075!6.67e-13!86;UBERON:0007284!6.67e-13!86;UBERON:0000033!4.27e-11!123;UBERON:0002771!1.22e-10!3;UBERON:0000153!1.91e-10!129;UBERON:0007811!1.91e-10!129;UBERON:0000924!3.09e-09!173;UBERON:0006601!3.09e-09!173;UBERON:0002022!2.02e-08!1;UBERON:0003112!2.33e-08!1;UBERON:0000032!2.33e-08!1;UBERON:0005253!2.33e-08!1;UBERON:0003128!2.33e-08!1;UBERON:0002241!2.33e-08!1;UBERON:0001703!2.33e-08!1;UBERON:0004761!2.33e-08!1;UBERON:0009617!2.33e-08!1;UBERON:0004121!2.36e-08!169;UBERON:0007190!2.89e-08!1;UBERON:0002581!3.33e-08!1;UBERON:0002506!5.82e-08!1;UBERON:0001769!5.82e-08!1;UBERON:0001882!6.24e-08!1;UBERON:0005403!6.24e-08!1|ontology_enrichment_uberon_v019=UBERON:0002702;3.52e-50;2!UBERON:0001870;5.04e-34;3!UBERON:0000200;8.34e-18;6|ontology_enrichment_uberon_v019_2=UBERON:0002702,4.52e-50,2;UBERON:0001870,5.96e-34,3;UBERON:0000200,9.07e-18,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4124158349861,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.001527445652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:3442892..3442893,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:3442892..3442893,+ | |||
|id=chr10:3442892..3442893,+ | |||
|ontology_enrichment_celltype=CL:0001024!2.69e-08!1;CL:0000342!5.82e-08!1;CL:0002565!5.82e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-15;7!CL:0000586;1.78e-15;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.65e-15,7;CL:0000586,1.65e-15,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.25e-35!22;UBERON:0001869!4.19e-33!32;UBERON:0001950!1.73e-31!20;UBERON:0001893!4.49e-31!34;UBERON:0000956!1.42e-30!25;UBERON:0000203!1.42e-30!25;UBERON:0002791!3.12e-27!33;UBERON:0002020!2.16e-26!34;UBERON:0003528!2.16e-26!34;UBERON:0002780!1.72e-25!41;UBERON:0001890!1.72e-25!41;UBERON:0006240!1.72e-25!41;UBERON:0003080!7.68e-25!42;UBERON:0003056!3.48e-19!61;UBERON:0000200!4.53e-19!6;UBERON:0001017!4.06e-18!82;UBERON:0001049!8.76e-18!57;UBERON:0005068!8.76e-18!57;UBERON:0006241!8.76e-18!57;UBERON:0007135!8.76e-18!57;UBERON:0005743!3.75e-17!86;UBERON:0002616!4.14e-17!59;UBERON:0000955!1.53e-16!69;UBERON:0006238!1.53e-16!69;UBERON:0000073!2.86e-15!94;UBERON:0001016!2.86e-15!94;UBERON:0001871!2.53e-14!7;UBERON:0002346!3.90e-14!90;UBERON:0007023!4.09e-14!115;UBERON:0000349!3.16e-13!5;UBERON:0001872!4.58e-13!5;UBERON:0003075!6.67e-13!86;UBERON:0007284!6.67e-13!86;UBERON:0000033!4.27e-11!123;UBERON:0002771!1.22e-10!3;UBERON:0000153!1.91e-10!129;UBERON:0007811!1.91e-10!129;UBERON:0000924!3.09e-09!173;UBERON:0006601!3.09e-09!173;UBERON:0002022!2.02e-08!1;UBERON:0003112!2.33e-08!1;UBERON:0000032!2.33e-08!1;UBERON:0005253!2.33e-08!1;UBERON:0003128!2.33e-08!1;UBERON:0002241!2.33e-08!1;UBERON:0001703!2.33e-08!1;UBERON:0004761!2.33e-08!1;UBERON:0009617!2.33e-08!1;UBERON:0004121!2.36e-08!169;UBERON:0007190!2.89e-08!1;UBERON:0002581!3.33e-08!1;UBERON:0002506!5.82e-08!1;UBERON:0001769!5.82e-08!1;UBERON:0001882!6.24e-08!1;UBERON:0005403!6.24e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;3.52e-50;2!UBERON:0001870;5.04e-34;3!UBERON:0000200;8.34e-18;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,4.52e-50,2;UBERON:0001870,5.96e-34,3;UBERON:0000200,9.07e-18,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4124158349861,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.001527445652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3442892..3442893,+ | |||
}} |
Revision as of 13:15, 10 September 2013
Short description: | p@chr10:3442892..3442893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3442892..3442893, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.65e-15 | 7 |
germ cell | 1.65e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 4.52e-50 | 2 |
frontal cortex | 5.96e-34 | 3 |
gyrus | 9.07e-18 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.