FFCP PHASE1:Hg19::chr10:54367116..54367120,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C234|description=CAGE_peak_at_chr10:54367116..54367120,+|id=chr10:54367116..54367120,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000083;3.42e-11;4!CL:0002251;5.70e-09;20|ontology_enrichment_celltype_v019_2=CL:0000083,3.42e-11,4;CL:0002251,5.93e-09,20;CL:0000223,6.27e-07,58|ontology_enrichment_development_v019=UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!CL:0000223;9.54e-07;58|ontology_enrichment_disease=DOID:1749!7.25e-17!14;DOID:305!1.32e-09!106;DOID:162!5.98e-09!235;DOID:14566!1.21e-08!239;DOID:7!1.26e-08!39;DOID:0050687!4.86e-08!143|ontology_enrichment_disease_v019=DOID:4074;5.69e-21;2!DOID:4905;5.69e-21;2!DOID:3498;5.69e-21;2!DOID:1749;2.24e-12;14!DOID:1793;3.42e-11;4!DOID:170;6.78e-08;6|ontology_enrichment_disease_v019_2=DOID:4074,5.70e-21,2;DOID:4905,5.70e-21,2;DOID:3498,5.70e-21,2;DOID:1749,2.37e-12,14;DOID:1793,3.42e-11,4;DOID:170,6.78e-08,6|ontology_enrichment_uberon=UBERON:0003343!2.82e-12!4;UBERON:0004785!2.82e-12!4;UBERON:0002394!1.47e-11!4;UBERON:0003928!1.47e-11!4;UBERON:0002294!1.91e-11!7;UBERON:0001173!1.91e-11!7;UBERON:0004912!1.91e-11!7;UBERON:0003729!6.61e-10!5|ontology_enrichment_uberon_v019=UBERON:0002134;2.21e-40;1!UBERON:0005208;2.21e-40;1!UBERON:0004145;2.21e-40;1!UBERON:0005946;2.21e-40;1!UBERON:0005965;2.21e-40;1!UBERON:0002078;2.21e-40;1!UBERON:0003343;2.22e-40;4!UBERON:0004785;2.22e-40;4!UBERON:0000974;2.38e-27;6!UBERON:0002081;5.69e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0003729;3.03e-13;13!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0000344;5.70e-09;20|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.48e-40,1;UBERON:0005208,1.48e-40,1;UBERON:0005946,1.48e-40,1;UBERON:0005965,1.48e-40,1;UBERON:0002078,1.48e-40,1;UBERON:0003343,2.71e-40,4;UBERON:0004785,2.71e-40,4;UBERON:0002081,4.66e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0000974,7.51e-17,10;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0004151,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0004145,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0003729,3.22e-13,13;UBERON:0000344,5.93e-09,20;UBERON:0000166,3.15e-08,22;UBERON:0004797,5.70e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0.343609788497747,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,2.11444506695002,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63146558453795,0.471878893390961,0,1.15525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_at_chr10:54367116..54367120,+ | |||
|id=chr10:54367116..54367120,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000083;3.42e-11;4!CL:0002251;5.70e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,3.42e-11,4;CL:0002251,5.93e-09,20;CL:0000223,6.27e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.69e-21;2!UBERON:0010056;5.69e-21;2!UBERON:0005062;3.42e-11;4!UBERON:0007284;3.42e-11;4!CL:0000223;9.54e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!7.25e-17!14;DOID:305!1.32e-09!106;DOID:162!5.98e-09!235;DOID:14566!1.21e-08!239;DOID:7!1.26e-08!39;DOID:0050687!4.86e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4074;5.69e-21;2!DOID:4905;5.69e-21;2!DOID:3498;5.69e-21;2!DOID:1749;2.24e-12;14!DOID:1793;3.42e-11;4!DOID:170;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,5.70e-21,2;DOID:4905,5.70e-21,2;DOID:3498,5.70e-21,2;DOID:1749,2.37e-12,14;DOID:1793,3.42e-11,4;DOID:170,6.78e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003343!2.82e-12!4;UBERON:0004785!2.82e-12!4;UBERON:0002394!1.47e-11!4;UBERON:0003928!1.47e-11!4;UBERON:0002294!1.91e-11!7;UBERON:0001173!1.91e-11!7;UBERON:0004912!1.91e-11!7;UBERON:0003729!6.61e-10!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.21e-40;1!UBERON:0005208;2.21e-40;1!UBERON:0004145;2.21e-40;1!UBERON:0005946;2.21e-40;1!UBERON:0005965;2.21e-40;1!UBERON:0002078;2.21e-40;1!UBERON:0003343;2.22e-40;4!UBERON:0004785;2.22e-40;4!UBERON:0000974;2.38e-27;6!UBERON:0002081;5.69e-21;2!UBERON:0002133;5.69e-21;2!UBERON:0001723;1.83e-14;3!UBERON:0003978;1.83e-14;3!UBERON:0004151;1.83e-14;3!UBERON:0000946;1.83e-14;3!UBERON:0001033;1.83e-14;3!UBERON:0003729;3.03e-13;13!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0000344;5.70e-09;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.48e-40,1;UBERON:0005208,1.48e-40,1;UBERON:0005946,1.48e-40,1;UBERON:0005965,1.48e-40,1;UBERON:0002078,1.48e-40,1;UBERON:0003343,2.71e-40,4;UBERON:0004785,2.71e-40,4;UBERON:0002081,4.66e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0000974,7.51e-17,10;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0004151,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0004145,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0001723,2.09e-14,3;UBERON:0001033,2.09e-14,3;UBERON:0010056,2.09e-14,3;UBERON:0003729,3.22e-13,13;UBERON:0000344,5.93e-09,20;UBERON:0000166,3.15e-08,22;UBERON:0004797,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0.343609788497747,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,2.11444506695002,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63146558453795,0.471878893390961,0,1.15525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:54367116..54367120,+ | |||
}} |
Revision as of 13:39, 10 September 2013
Short description: | p@chr10:54367116..54367120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:54367116..54367120, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 3.42e-11 | 4 |
epithelial cell of alimentary canal | 5.93e-09 | 20 |
endodermal cell | 6.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.48e-40 | 1 |
right atrium valve | 1.48e-40 | 1 |
outflow tract of atrium | 1.48e-40 | 1 |
outflow part of right atrium | 1.48e-40 | 1 |
right cardiac atrium | 1.48e-40 | 1 |
mucosa of oral region | 2.71e-40 | 4 |
respiratory system mucosa | 2.71e-40 | 4 |
cardiac atrium | 4.66e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
neck | 7.51e-17 | 10 |
valve | 1.60e-14 | 3 |
cardiac mesenchyme | 1.60e-14 | 3 |
cardiac chamber | 1.60e-14 | 3 |
cardial valve | 1.60e-14 | 3 |
tunica intima | 1.60e-14 | 3 |
heart layer | 1.60e-14 | 3 |
outflow tract | 1.60e-14 | 3 |
endocardium | 1.60e-14 | 3 |
endocardial cushion | 1.60e-14 | 3 |
presumptive endocardium | 1.60e-14 | 3 |
tongue | 2.09e-14 | 3 |
gustatory system | 2.09e-14 | 3 |
future tongue | 2.09e-14 | 3 |
mouth mucosa | 3.22e-13 | 13 |
mucosa | 5.93e-09 | 20 |
oral opening | 3.15e-08 | 22 |
blood vessel layer | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 5.70e-21 | 2 |
pancreatic carcinoma | 5.70e-21 | 2 |
pancreatic ductal adenocarcinoma | 5.70e-21 | 2 |
squamous cell carcinoma | 2.37e-12 | 14 |
pancreatic cancer | 3.42e-11 | 4 |
endocrine gland cancer | 6.78e-08 | 6 |
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