FFCP PHASE1:Hg19::chr10:75883118..75883131,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26985|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=569|TSSclassifier=N|UniProt=|association_with_transcript=223bp_to_AL133610_5end|description=CAGE_peak_6_at_AP3M1_5end|id=chr10:75883118..75883131,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;6.51e-20;2!CL:0000775;3.40e-14;3!CL:0002231;1.32e-13;3!CL:1000306;1.95e-10;4!CL:0002547;1.95e-10;4|ontology_enrichment_celltype_v019_2=CL:0000775,3.19e-14,3;CL:0002231,2.06e-13,3;CL:1000306,3.14e-10,4;CL:0002547,3.14e-10,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;6.51e-20;2|ontology_enrichment_disease_v019_2=DOID:1909,2.49e-20,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001301;7.81e-11;1!UBERON:0002171;7.81e-11;1!UBERON:0006518;7.81e-11;1!UBERON:0008949;7.81e-11;1!UBERON:0000101;7.81e-11;1!UBERON:0002167;7.81e-11;1!UBERON:0004797;1.95e-10;4!UBERON:0000415;1.95e-10;4!UBERON:0007240;1.95e-10;4!UBERON:0005742;1.95e-10;4!UBERON:0005734;1.95e-10;4!UBERON:0004664;1.95e-10;4!UBERON:0004663;1.95e-10;4!UBERON:0003101;4.25e-07;22!UBERON:0000079;4.25e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.58e-11,1;UBERON:0006518,4.58e-11,1;UBERON:0008949,4.58e-11,1;UBERON:0000101,4.58e-11,1;UBERON:0002167,4.58e-11,1;UBERON:0001301,9.97e-11,1;UBERON:0000415,3.14e-10,4;UBERON:0007240,3.14e-10,4;UBERON:0005742,3.14e-10,4;UBERON:0005734,3.14e-10,4;UBERON:0004664,3.14e-10,4;UBERON:0004663,3.14e-10,4;UBERON:0003101,4.39e-07,22;UBERON:0000079,4.39e-07,22|phase1_expression=0.726713517082227,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.382067028739756,0.492603536699674,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0.223915474239924,0.647787332037959,0.515151135268373,0.581592955118259,0,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.83593247695339,0,0,0,0.334231370655521,0,0,0,0,0,0.657751618414705,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,2.3858578411533,0,0.189069634328136,0,0,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0.446498641420399,0,0.112611480483322,0,0,0,0,0,0,0,1.13967460498122,0.132409180813219,1.14734648299525,0,0,0,0.74000264525148,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.747243402759005,0.23486899728753,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0,0.213557388818567,0,0,0.309157587715317,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0.272746120590835,0,0.365921118388786,0.265059536642971,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.548751427043128,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0.792435906119034,0.414656231081544,0.864719720501769,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.616964956219941,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,0.99972991182057,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.112085143993527,0.197030760201927,0,0.128343036279748,1.52456774533478,1.30139853857622,0,0.167516265334349,0,2.99602809578873,2.99161459204025,0,0.24538298343828,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.521301686808497,0,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,0.248107807818777,0,0,0.640695746278505,1.02341449813341,0.321707842287215,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.116210378459959,1.32945394550784,1.00253235151642,0.736647911487171,0.114814448164607,0,0.262248829918848,0,0.231046011313244,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0.515205058238611,0.0915694648183434,0.495056999523528,0,0.650060246036521,0,0.580024309752732,0,0,0.137836572484531,0.322260734604821,0,0,0.356128142586949,0.330569830721956,0,0.127612712494584,0.2023155617111,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.19063019392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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26985 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=569 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=223bp_to_AL133610_5end | |||
|description=CAGE_peak_6_at_AP3M1_5end | |||
|id=chr10:75883118..75883131,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.51e-20;2!CL:0000775;3.40e-14;3!CL:0002231;1.32e-13;3!CL:1000306;1.95e-10;4!CL:0002547;1.95e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.19e-14,3;CL:0002231,2.06e-13,3;CL:1000306,3.14e-10,4;CL:0002547,3.14e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;6.51e-20;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.49e-20,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;7.81e-11;1!UBERON:0002171;7.81e-11;1!UBERON:0006518;7.81e-11;1!UBERON:0008949;7.81e-11;1!UBERON:0000101;7.81e-11;1!UBERON:0002167;7.81e-11;1!UBERON:0004797;1.95e-10;4!UBERON:0000415;1.95e-10;4!UBERON:0007240;1.95e-10;4!UBERON:0005742;1.95e-10;4!UBERON:0005734;1.95e-10;4!UBERON:0004664;1.95e-10;4!UBERON:0004663;1.95e-10;4!UBERON:0003101;4.25e-07;22!UBERON:0000079;4.25e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.58e-11,1;UBERON:0006518,4.58e-11,1;UBERON:0008949,4.58e-11,1;UBERON:0000101,4.58e-11,1;UBERON:0002167,4.58e-11,1;UBERON:0001301,9.97e-11,1;UBERON:0000415,3.14e-10,4;UBERON:0007240,3.14e-10,4;UBERON:0005742,3.14e-10,4;UBERON:0005734,3.14e-10,4;UBERON:0004664,3.14e-10,4;UBERON:0004663,3.14e-10,4;UBERON:0003101,4.39e-07,22;UBERON:0000079,4.39e-07,22 | |||
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| |||
|short_description=p6@AP3M1 | |||
}} |
Revision as of 14:25, 10 September 2013
Short description: | p6@AP3M1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_AP3M1_5end |
Coexpression cluster: | NA |
Association with transcript: | 223bp_to_AL133610_5end |
EntrezGene: | AP3M1 |
HGNC: | 569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.19e-14 | 3 |
epithelial cell of prostate | 2.06e-13 | 3 |
fibroblast of tunica adventitia of artery | 3.14e-10 | 4 |
fibroblast of the aortic adventitia | 3.14e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.58e-11 | 1 |
right lung lobe | 4.58e-11 | 1 |
lower lobe of lung | 4.58e-11 | 1 |
lobe of lung | 4.58e-11 | 1 |
right lung | 4.58e-11 | 1 |
epididymis | 9.97e-11 | 1 |
artery wall | 3.14e-10 | 4 |
tunica adventitia of artery | 3.14e-10 | 4 |
adventitia | 3.14e-10 | 4 |
tunica adventitia of blood vessel | 3.14e-10 | 4 |
aorta tunica adventitia | 3.14e-10 | 4 |
aorta wall | 3.14e-10 | 4 |
male organism | 4.39e-07 | 22 |
male reproductive system | 4.39e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.49e-20 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.