FFCP PHASE1:Hg19::chr11:2017138..2017174,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283120|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=4713|TSSclassifier=S|UniProt=|association_with_transcript=43bp_to_BC106078_5end|coexpression_cluster_id=C227|description=CAGE_peak_18_at_H19_5end|id=chr11:2017138..2017174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;2.16e-14;19!CL:0002577;2.16e-07;3!CL:0002541;2.65e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,2.19e-14,19;CL:0002577,2.25e-07,3;CL:0002541,2.65e-07,3|ontology_enrichment_development_v019=UBERON:0008947;2.47e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!6.01e-12!14;UBERON:0000158!6.01e-12!14;UBERON:0003104!2.36e-11!238;UBERON:0009142!2.36e-11!238;UBERON:0001737!2.15e-10!9;UBERON:0004923!8.10e-10!57;UBERON:0000481!2.46e-09!347;UBERON:0001557!2.53e-09!19;UBERON:0003124!4.36e-09!7;UBERON:0000478!7.51e-09!24;UBERON:0004119!9.25e-09!169;UBERON:0000925!9.25e-09!169;UBERON:0006595!9.25e-09!169;UBERON:0004921!5.00e-08!129;UBERON:0004185!5.00e-08!129;UBERON:0000077!6.47e-08!130;UBERON:0001007!2.40e-07!155;UBERON:0001555!2.40e-07!155;UBERON:0007026!2.40e-07!155;UBERON:0000064!2.68e-07!219;UBERON:0003103!2.98e-07!69;UBERON:0000926!4.82e-07!448;UBERON:0004120!4.82e-07!448;UBERON:0006603!4.82e-07!448|ontology_enrichment_uberon_v019=UBERON:0001737;5.20e-17;9!UBERON:0001557;5.20e-17;9!UBERON:0000478;6.84e-15;24!UBERON:0005631;2.46e-13;10!UBERON:0000158;2.46e-13;10!UBERON:0001134;4.47e-12;16!UBERON:0002036;4.47e-12;16!UBERON:0001987;4.03e-09;4!UBERON:0000305;4.85e-08;7!UBERON:0000922;6.00e-08;49!UBERON:0003124;2.65e-07;3!UBERON:0000920;2.65e-07;3!UBERON:0001723;4.19e-07;3!UBERON:0001033;4.19e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.49e-20,14;UBERON:0000158,1.49e-20,14;UBERON:0001737,5.17e-17,9;UBERON:0000478,7.02e-15,24;UBERON:0003124,9.99e-15,7;UBERON:0001557,5.74e-13,19;UBERON:0001987,4.29e-09,4;UBERON:0004340,4.29e-09,4;UBERON:0004119,5.66e-09,160;UBERON:0000925,5.66e-09,160;UBERON:0006595,5.66e-09,160;UBERON:0004921,1.78e-08,118;UBERON:0000305,4.79e-08,7;UBERON:0001041,6.09e-08,87;UBERON:0000920,2.65e-07,3;UBERON:0001007,3.50e-07,145;UBERON:0001555,3.50e-07,145;UBERON:0007026,3.50e-07,145;UBERON:0001723,4.51e-07,3;UBERON:0001033,4.51e-07,3;UBERON:0010056,4.51e-07,3;UBERON:0004871,5.86e-07,8;UBERON:0000072,6.29e-07,47|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,0,0.893922188854576,7.85104671690332,2.53299878168311,0.631719873426831,0,0.245733936501509,0.697801167972428,22.9363440736681,19.782523367134,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3233045996527,0,0.12786256184353,0,0,0,0,3.89307896242109,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0.163461903113459,0.605429710579726,9.21881479167998,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,1.04574548582567,0.725627385107593,0.252320850875628,0,0,0,0,0,0,6.7434876022711,7.08055698328027,8.67639707580535,5.18381671842252,6.972142210957,9.72809538355496,8.62920372225052,8.43752300038988,11.9271618653381,0,0,2.4694440679884,8.82052268313252,2.53510069643662,0,3.54473944008842,0,0,0,0,0,0,2.77765335475589,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,36.8982691666181,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,2.75084482668401,4.72595541865882,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,0.542530047399471,0,0,0,0,0,0,2.0694614258501,0,0.184369168541703,0,11.1606659753762,15.4414540714885,0,0,0,14.2469958579742,68.2385301993038,17.5386370131215,2.72918588600655,0.306923946576125,1.40330047216537,1.40953064181271,0,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,10.7959076883203,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,0,1.93341436584244,0.462145851343933,1.38153307253517,1.10269257987624,0.214840489736547,0.580066775656914,0.767039646744908,7.03353081609225,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,57.3438243965453,0,0,0.539617372749944,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.88424136911809,0,0,0.211107635297664,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4713 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=43bp_to_BC106078_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_18_at_H19_5end | |||
|id=chr11:2017138..2017174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.16e-14;19!CL:0002577;2.16e-07;3!CL:0002541;2.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.19e-14,19;CL:0002577,2.25e-07,3;CL:0002541,2.65e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.47e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.01e-12!14;UBERON:0000158!6.01e-12!14;UBERON:0003104!2.36e-11!238;UBERON:0009142!2.36e-11!238;UBERON:0001737!2.15e-10!9;UBERON:0004923!8.10e-10!57;UBERON:0000481!2.46e-09!347;UBERON:0001557!2.53e-09!19;UBERON:0003124!4.36e-09!7;UBERON:0000478!7.51e-09!24;UBERON:0004119!9.25e-09!169;UBERON:0000925!9.25e-09!169;UBERON:0006595!9.25e-09!169;UBERON:0004921!5.00e-08!129;UBERON:0004185!5.00e-08!129;UBERON:0000077!6.47e-08!130;UBERON:0001007!2.40e-07!155;UBERON:0001555!2.40e-07!155;UBERON:0007026!2.40e-07!155;UBERON:0000064!2.68e-07!219;UBERON:0003103!2.98e-07!69;UBERON:0000926!4.82e-07!448;UBERON:0004120!4.82e-07!448;UBERON:0006603!4.82e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.20e-17;9!UBERON:0001557;5.20e-17;9!UBERON:0000478;6.84e-15;24!UBERON:0005631;2.46e-13;10!UBERON:0000158;2.46e-13;10!UBERON:0001134;4.47e-12;16!UBERON:0002036;4.47e-12;16!UBERON:0001987;4.03e-09;4!UBERON:0000305;4.85e-08;7!UBERON:0000922;6.00e-08;49!UBERON:0003124;2.65e-07;3!UBERON:0000920;2.65e-07;3!UBERON:0001723;4.19e-07;3!UBERON:0001033;4.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.49e-20,14;UBERON:0000158,1.49e-20,14;UBERON:0001737,5.17e-17,9;UBERON:0000478,7.02e-15,24;UBERON:0003124,9.99e-15,7;UBERON:0001557,5.74e-13,19;UBERON:0001987,4.29e-09,4;UBERON:0004340,4.29e-09,4;UBERON:0004119,5.66e-09,160;UBERON:0000925,5.66e-09,160;UBERON:0006595,5.66e-09,160;UBERON:0004921,1.78e-08,118;UBERON:0000305,4.79e-08,7;UBERON:0001041,6.09e-08,87;UBERON:0000920,2.65e-07,3;UBERON:0001007,3.50e-07,145;UBERON:0001555,3.50e-07,145;UBERON:0007026,3.50e-07,145;UBERON:0001723,4.51e-07,3;UBERON:0001033,4.51e-07,3;UBERON:0010056,4.51e-07,3;UBERON:0004871,5.86e-07,8;UBERON:0000072,6.29e-07,47 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.422863212287913,0,0.893922188854576,7.85104671690332,2.53299878168311,0.631719873426831,0,0.245733936501509,0.697801167972428,22.9363440736681,19.782523367134,0.37129905888014,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,1.08371286321253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.3233045996527,0,0.12786256184353,0,0,0,0,3.89307896242109,0,0,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0.163461903113459,0.605429710579726,9.21881479167998,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,1.04574548582567,0.725627385107593,0.252320850875628,0,0,0,0,0,0,6.7434876022711,7.08055698328027,8.67639707580535,5.18381671842252,6.972142210957,9.72809538355496,8.62920372225052,8.43752300038988,11.9271618653381,0,0,2.4694440679884,8.82052268313252,2.53510069643662,0,3.54473944008842,0,0,0,0,0,0,2.77765335475589,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,36.8982691666181,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,2.75084482668401,4.72595541865882,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,0.542530047399471,0,0,0,0,0,0,2.0694614258501,0,0.184369168541703,0,11.1606659753762,15.4414540714885,0,0,0,14.2469958579742,68.2385301993038,17.5386370131215,2.72918588600655,0.306923946576125,1.40330047216537,1.40953064181271,0,0.482561763430822,4.45254199334973,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.215915916102139,10.7959076883203,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,0,1.93341436584244,0.462145851343933,1.38153307253517,1.10269257987624,0.214840489736547,0.580066775656914,0.767039646744908,7.03353081609225,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0.255897791311334,57.3438243965453,0,0,0.539617372749944,0.274537029736055,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.88424136911809,0,0,0.211107635297664,0.987884678879706,0.379473173765715,0.699869440489966,0,0,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,68.9971560891924,29.3995034024312,152.04454753912,0,0,0,0,0.422250816255987,0.19924798825107,1.10513566212459,3.77899121781414,0,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,1.65471377237555,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0.69169171316418,5.29570102017656,6.7361370591645,48.1691751195198,4.30508688988753,158.311328477535,0,0,0,0.225595660617181,0.784250137270958,0.503464760927528,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0,0,0,0,118.781491800221,0,0,0,0,0,14.5188859258397,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0.775912131907355,0.176512253383001,4.29363407483012,0,0,0,0.586654148204409,0,0.426905989478705,38.1636354301869,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,1.67569440763353,0.687481272035051,2.15361907373044,0,1.71690419254628,1.33902874465124,4.0981918216903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788057072991982,2.62272940674991,0,0,0,0.714695326373367,1.98627591109629,0.25426853765475,0,0,0,0,0,0,0,0.879313402068495,80.829202236455,0,0,0,0,0.320362237703084,2.20086027139532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8013049391682,0,0.673498977531838,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,4.20516764447059,0,0.764467467344097,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,1.46742878817343,12.3612462780862,0,0,0,0.451261970095544,0,0,25.404949364698,0,1.18284868973636,0,0,0,0,0,0,6.94695649745012,0,0.255524855279191,0,0,0,0,8.51542753561333,0,0.857440047187092,0,0,0,0,0.627944742804112,0,14.2938803290032,26.4816028947754,0,0,0.142953088353313,0,0,0,0,0,0,0.691259661814092,0,0,0,2.11693525095465,3.43660302816075,0,0,0,0,0,25.8971534875158,3.4905354331124,16.2374020387348,17.9713067431882,0,0,0,0,0,0,0,1.74847648403166,0,1.96118657403124,0.707029641304878,0,0,2.113278637917,0,0.0939839179798536,1.80482086326016,0,0.178553938605658,0,0,2.92134555298607,0,0,0.315543124386369,0,0,41.2640935602012,0.743990036333503,0.462175628631418,4.32626562123789,0,0.437062287854782,0.126698501011437,0,0,0.0918948995348449,0,0.378893491091197,0.803892390468535,0,0,2.55880778281177,15.4741880451431,0,0.434523000071005,0,0.445530107947154,10.9143282037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| |||
|short_description=p18@H19 | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p18@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 43bp_to_BC106078_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.19e-14 | 19 |
placental epithelial cell | 2.25e-07 | 3 |
chorionic membrane mesenchymal stem cell | 2.65e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.49e-20 | 14 |
membranous layer | 1.49e-20 | 14 |
larynx | 5.17e-17 | 9 |
extraembryonic structure | 7.02e-15 | 24 |
chorion | 9.99e-15 | 7 |
upper respiratory tract | 5.74e-13 | 19 |
placenta | 4.29e-09 | 4 |
allantois | 4.29e-09 | 4 |
endoderm-derived structure | 5.66e-09 | 160 |
endoderm | 5.66e-09 | 160 |
presumptive endoderm | 5.66e-09 | 160 |
subdivision of digestive tract | 1.78e-08 | 118 |
amnion | 4.79e-08 | 7 |
foregut | 6.09e-08 | 87 |
egg chorion | 2.65e-07 | 3 |
digestive system | 3.50e-07 | 145 |
digestive tract | 3.50e-07 | 145 |
primitive gut | 3.50e-07 | 145 |
tongue | 4.51e-07 | 3 |
gustatory system | 4.51e-07 | 3 |
future tongue | 4.51e-07 | 3 |
somatic layer of lateral plate mesoderm | 5.86e-07 | 8 |
segment of respiratory tract | 6.29e-07 | 47 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.