FFCP PHASE1:Hg19::chr11:62525554..62525590,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C49|description=CAGE_peak_at_chr11:62525554..62525590,-|id=chr11:62525554..62525590,-|ontology_enrichment_celltype=CL:0002322!1.48e-48!5;CL:0000039!5.83e-22!7;CL:0000586!5.83e-22!7;CL:0000540!2.46e-15!6;CL:0000031!2.46e-15!6;CL:0000404!2.46e-15!6;CL:0000047!1.22e-11!8;CL:0000148!2.80e-09!10;CL:0000541!2.80e-09!10;CL:0000147!9.23e-07!14|ontology_enrichment_celltype_v019=CL:0002322;1.48e-89;5!CL:0002321;4.17e-30;15!CL:0000540;7.10e-28;6!CL:0000404;7.10e-28;6!CL:0000148;1.03e-16;10!CL:0000147;3.94e-12;14!CL:0000039;3.48e-11;7!CL:0000586;3.48e-11;7!CL:0000710;1.13e-08;20|ontology_enrichment_celltype_v019_2=CL:0002322,9.35e-90,5;CL:0000540,7.10e-28,6;CL:0000031,7.10e-28,6;CL:0000404,7.10e-28,6;CL:0000047,4.20e-21,8;CL:0000148,9.05e-17,10;CL:0000541,9.05e-17,10;CL:0000147,3.58e-12,14;CL:0000039,4.27e-11,7;CL:0000586,4.27e-11,7;CL:0000133,1.56e-10,59;CL:0000710,1.05e-08,20;CL:0000221,1.19e-08,72|ontology_enrichment_development_v019=CL:0000031;7.10e-28;6!UBERON:0009117;4.18e-08;10!UBERON:0005564;4.18e-08;10|ontology_enrichment_disease=DOID:3095!3.98e-07!22;DOID:2994!3.98e-07!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!2.97e-19!8;UBERON:0003135!4.47e-14!11;UBERON:0006331!2.19e-13!3;UBERON:0002038!9.97e-11!1;UBERON:0009661!9.97e-11!1;UBERON:0002336!1.21e-10!1;UBERON:0001018!1.21e-10!1;UBERON:0002473!1.21e-10!1;UBERON:0005340!1.21e-10!1;UBERON:0002316!1.21e-10!1;UBERON:0003544!1.21e-10!1;UBERON:0001020!1.21e-10!1;UBERON:0005970!1.21e-10!1;UBERON:0002437!1.21e-10!1;UBERON:0000991!1.85e-07!21;UBERON:0009196!1.85e-07!21;UBERON:0009117!1.85e-07!21;UBERON:0005564!1.85e-07!21;UBERON:0004176!3.98e-07!22;UBERON:0003101!3.98e-07!22;UBERON:0000079!3.98e-07!22|ontology_enrichment_uberon_v019=UBERON:0000922;5.07e-10;49!UBERON:0000473;6.63e-10;8!UBERON:0003135;1.90e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.94e-10,8;UBERON:0003135,2.16e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78118489001746,3.04818467139416,1.85910308591229,1.34759371519982,1.51392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,2.08979093004525,2.61324929534744,2.9080823662043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,1.01988829741982,0.801652215796681,0.735159196278759,1.25353769646188,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:62525554..62525590,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr11:62525554..62525590,- | |||
|id=chr11:62525554..62525590,- | |||
|ontology_enrichment_celltype=CL:0002322!1.48e-48!5;CL:0000039!5.83e-22!7;CL:0000586!5.83e-22!7;CL:0000540!2.46e-15!6;CL:0000031!2.46e-15!6;CL:0000404!2.46e-15!6;CL:0000047!1.22e-11!8;CL:0000148!2.80e-09!10;CL:0000541!2.80e-09!10;CL:0000147!9.23e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.48e-89;5!CL:0002321;4.17e-30;15!CL:0000540;7.10e-28;6!CL:0000404;7.10e-28;6!CL:0000148;1.03e-16;10!CL:0000147;3.94e-12;14!CL:0000039;3.48e-11;7!CL:0000586;3.48e-11;7!CL:0000710;1.13e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.35e-90,5;CL:0000540,7.10e-28,6;CL:0000031,7.10e-28,6;CL:0000404,7.10e-28,6;CL:0000047,4.20e-21,8;CL:0000148,9.05e-17,10;CL:0000541,9.05e-17,10;CL:0000147,3.58e-12,14;CL:0000039,4.27e-11,7;CL:0000586,4.27e-11,7;CL:0000133,1.56e-10,59;CL:0000710,1.05e-08,20;CL:0000221,1.19e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000031;7.10e-28;6!UBERON:0009117;4.18e-08;10!UBERON:0005564;4.18e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!3.98e-07!22;DOID:2994!3.98e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.97e-19!8;UBERON:0003135!4.47e-14!11;UBERON:0006331!2.19e-13!3;UBERON:0002038!9.97e-11!1;UBERON:0009661!9.97e-11!1;UBERON:0002336!1.21e-10!1;UBERON:0001018!1.21e-10!1;UBERON:0002473!1.21e-10!1;UBERON:0005340!1.21e-10!1;UBERON:0002316!1.21e-10!1;UBERON:0003544!1.21e-10!1;UBERON:0001020!1.21e-10!1;UBERON:0005970!1.21e-10!1;UBERON:0002437!1.21e-10!1;UBERON:0000991!1.85e-07!21;UBERON:0009196!1.85e-07!21;UBERON:0009117!1.85e-07!21;UBERON:0005564!1.85e-07!21;UBERON:0004176!3.98e-07!22;UBERON:0003101!3.98e-07!22;UBERON:0000079!3.98e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;5.07e-10;49!UBERON:0000473;6.63e-10;8!UBERON:0003135;1.90e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.94e-10,8;UBERON:0003135,2.16e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78118489001746,3.04818467139416,1.85910308591229,1.34759371519982,1.51392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,2.08979093004525,2.61324929534744,2.9080823662043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,1.01988829741982,0.801652215796681,0.735159196278759,1.25353769646188,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:62525554..62525590,- | |||
}} |
Revision as of 18:35, 10 September 2013
Short description: | p@chr11:62525554..62525590, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:62525554..62525590, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.35e-90 | 5 |
neuron | 7.10e-28 | 6 |
neuroblast | 7.10e-28 | 6 |
electrically signaling cell | 7.10e-28 | 6 |
neuronal stem cell | 4.20e-21 | 8 |
melanocyte | 9.05e-17 | 10 |
melanoblast | 9.05e-17 | 10 |
pigment cell | 3.58e-12 | 14 |
germ line cell | 4.27e-11 | 7 |
germ cell | 4.27e-11 | 7 |
neurectodermal cell | 1.56e-10 | 59 |
neurecto-epithelial cell | 1.05e-08 | 20 |
ectodermal cell | 1.19e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
testis | 7.94e-10 | 8 |
male reproductive organ | 2.16e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.