FFCP PHASE1:Hg19::chr11:67776077..67776088,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=410|TSSclassifier=S|UniProt=A3FMP9,P43353|association_with_transcript=29bp_to_ENST00000433100,ENST00000539229,NM_001161473,uc010rpy.1_5end|description=CAGE_peak_5_at_ALDH3B1_5end|id=chr11:67776077..67776088,+|ontology_enrichment_celltype=CL:0002586!8.20e-08!3|ontology_enrichment_celltype_v019=CL:0002586;2.09e-38;3!CL:0000149;5.28e-29;4!CL:0000147;1.01e-08;14|ontology_enrichment_celltype_v019_2=CL:0002586,1.11e-38,3;CL:0000149,3.29e-29,4;CL:0000147,8.83e-09,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.12e-07!106|ontology_enrichment_disease_v019=DOID:3493;1.27e-25;2!DOID:4960;1.04e-13;1!DOID:0070004;1.04e-13;1|ontology_enrichment_disease_v019_2=DOID:3493,2.37e-25,2;DOID:4960,8.58e-14,1;DOID:0070004,8.58e-14,1|ontology_enrichment_uberon=UBERON:0001737!6.14e-17!9;UBERON:0007023!1.68e-12!115;UBERON:0005743!5.17e-11!86;UBERON:0001049!1.34e-10!57;UBERON:0005068!1.34e-10!57;UBERON:0006241!1.34e-10!57;UBERON:0007135!1.34e-10!57;UBERON:0000073!4.49e-10!94;UBERON:0001016!4.49e-10!94;UBERON:0008947!2.09e-09!38;UBERON:0003258!2.09e-09!38;UBERON:0003075!2.39e-09!86;UBERON:0007284!2.39e-09!86;UBERON:0002780!2.64e-09!41;UBERON:0001890!2.64e-09!41;UBERON:0006240!2.64e-09!41;UBERON:0003080!5.49e-09!42;UBERON:0002616!6.73e-09!59;UBERON:0003056!9.46e-09!61;UBERON:0002346!1.24e-08!90;UBERON:0001557!1.73e-08!19;UBERON:0000955!1.93e-08!69;UBERON:0006238!1.93e-08!69;UBERON:0001893!5.13e-08!34;UBERON:0001017!7.47e-08!82;UBERON:0001781!8.20e-08!3;UBERON:0001782!8.20e-08!3;UBERON:0005424!8.20e-08!3;UBERON:0000966!1.80e-07!5;UBERON:0005388!1.80e-07!5;UBERON:0001802!1.80e-07!5;UBERON:0002791!3.67e-07!33;UBERON:0002020!6.71e-07!34;UBERON:0003528!6.71e-07!34|ontology_enrichment_uberon_v019=UBERON:0001781;2.09e-38;3!UBERON:0001782;2.09e-38;3!UBERON:0000966;2.37e-23;5!UBERON:0005388;2.37e-23;5!UBERON:0001802;2.37e-23;5!UBERON:0007625;5.89e-11;11|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.11e-38,3;UBERON:0005424,1.11e-38,3;UBERON:0001781,3.29e-29,4;UBERON:0000966,1.04e-19,6;UBERON:0005388,1.04e-19,6;UBERON:0001802,1.04e-19,6;UBERON:0007625,4.98e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,1.11957737119962,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.220587945464788,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,2.56450125116389,1.96808787419823,5.53143270929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,1.96558024679421,0.912938716132769,0.156679895773023,0,0,0,0,0,0,0,0,0,0.781552381608161,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,1.9692329214317,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,1.37897349296586,0,0,0,0,0,0,0,0.219385397153973,1.96089234334182,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,3.07956308191793,0,0.213574825135389,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,1.89436477626897,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=410 | |||
|TSSclassifier=S | |||
|UniProt=A3FMP9,P43353 | |||
|association_with_transcript=29bp_to_ENST00000433100,ENST00000539229,NM_001161473,uc010rpy.1_5end | |||
|description=CAGE_peak_5_at_ALDH3B1_5end | |||
|id=chr11:67776077..67776088,+ | |||
|ontology_enrichment_celltype=CL:0002586!8.20e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.09e-38;3!CL:0000149;5.28e-29;4!CL:0000147;1.01e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.11e-38,3;CL:0000149,3.29e-29,4;CL:0000147,8.83e-09,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.12e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.27e-25;2!DOID:4960;1.04e-13;1!DOID:0070004;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.37e-25,2;DOID:4960,8.58e-14,1;DOID:0070004,8.58e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.14e-17!9;UBERON:0007023!1.68e-12!115;UBERON:0005743!5.17e-11!86;UBERON:0001049!1.34e-10!57;UBERON:0005068!1.34e-10!57;UBERON:0006241!1.34e-10!57;UBERON:0007135!1.34e-10!57;UBERON:0000073!4.49e-10!94;UBERON:0001016!4.49e-10!94;UBERON:0008947!2.09e-09!38;UBERON:0003258!2.09e-09!38;UBERON:0003075!2.39e-09!86;UBERON:0007284!2.39e-09!86;UBERON:0002780!2.64e-09!41;UBERON:0001890!2.64e-09!41;UBERON:0006240!2.64e-09!41;UBERON:0003080!5.49e-09!42;UBERON:0002616!6.73e-09!59;UBERON:0003056!9.46e-09!61;UBERON:0002346!1.24e-08!90;UBERON:0001557!1.73e-08!19;UBERON:0000955!1.93e-08!69;UBERON:0006238!1.93e-08!69;UBERON:0001893!5.13e-08!34;UBERON:0001017!7.47e-08!82;UBERON:0001781!8.20e-08!3;UBERON:0001782!8.20e-08!3;UBERON:0005424!8.20e-08!3;UBERON:0000966!1.80e-07!5;UBERON:0005388!1.80e-07!5;UBERON:0001802!1.80e-07!5;UBERON:0002791!3.67e-07!33;UBERON:0002020!6.71e-07!34;UBERON:0003528!6.71e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.09e-38;3!UBERON:0001782;2.09e-38;3!UBERON:0000966;2.37e-23;5!UBERON:0005388;2.37e-23;5!UBERON:0001802;2.37e-23;5!UBERON:0007625;5.89e-11;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.11e-38,3;UBERON:0005424,1.11e-38,3;UBERON:0001781,3.29e-29,4;UBERON:0000966,1.04e-19,6;UBERON:0005388,1.04e-19,6;UBERON:0001802,1.04e-19,6;UBERON:0007625,4.98e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,1.11957737119962,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.220587945464788,0.435758888184812,0.237270619111097,0.404493924480493,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0,0,0,0,0.616339038092582,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,2.56450125116389,1.96808787419823,5.53143270929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0,0,0,0,0,0,1.96558024679421,0.912938716132769,0.156679895773023,0,0,0,0,0,0,0,0,0,0.781552381608161,0,1.23087398947712,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,1.9692329214317,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,1.37897349296586,0,0,0,0,0,0,0,0.219385397153973,1.96089234334182,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.476809736941136,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0.19566461893209,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,3.07956308191793,0,0.213574825135389,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.496771223531068,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,1.89436477626897,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0.781514011233092,0,0,0.887136517302272,0.202612753855184,0.781078098613847,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0.543757863814654,0.263091094251396,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,1.17780280338292,1.34109717480496,0,0,0,0,0,0.198950775161368,0,0,0,1.20770274853339,0.385870790539723,0,0.470317296361523,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0,0,0,0,0,0,0,0.134704106029175,0.215166616178029,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p5@ALDH3B1 | |||
}} |
Revision as of 19:19, 10 September 2013
Short description: | p5@ALDH3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ALDH3B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000433100, ENST00000539229, NM_001161473, uc010rpy.1_5end |
EntrezGene: | ALDH3B1 |
HGNC: | 410 |
UniProt: | A3FMP9P43353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.11e-38 | 3 |
visual pigment cell | 3.29e-29 | 4 |
pigment cell | 8.83e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.11e-38 | 3 |
presumptive retinal pigmented epithelium | 1.11e-38 | 3 |
layer of retina | 3.29e-29 | 4 |
retina | 1.04e-19 | 6 |
photoreceptor array | 1.04e-19 | 6 |
posterior segment of eyeball | 1.04e-19 | 6 |
pigment epithelium of eye | 4.98e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.37e-25 | 2 |
bone marrow cancer | 8.58e-14 | 1 |
myeloma | 8.58e-14 | 1 |
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