FFCP PHASE1:Hg19::chr12:123756648..123756659,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8099|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14002|TSSclassifier=S|UniProt=O14519|association_with_transcript=27bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end|description=CAGE_peak_8_at_CDK2AP1_5end|id=chr12:123756648..123756659,-|ontology_enrichment_celltype=CL:0000066!4.85e-13!254;CL:0002321!4.90e-09!248;CL:0000220!1.06e-08!246;CL:0000115!2.91e-07!35|ontology_enrichment_celltype_v019=CL:1000449;8.76e-07;15|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-08,253;CL:0000115,3.59e-08,36;CL:1000449,9.12e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!7.97e-14!286;UBERON:0004111!8.55e-14!241;UBERON:0000025!1.72e-11!194;UBERON:0000119!6.99e-11!312;UBERON:0000468!1.33e-10!659;UBERON:0000483!1.65e-10!309;UBERON:0000475!9.97e-10!365;UBERON:0000467!1.69e-09!625;UBERON:0000064!2.67e-09!219;UBERON:0000480!2.98e-09!626;UBERON:0000481!2.78e-08!347;UBERON:0000922!2.34e-07!612|ontology_enrichment_uberon_v019=UBERON:0006554;1.48e-07;30!UBERON:0001008;1.48e-07;30!UBERON:0002113;2.24e-07;24!UBERON:0011143;2.24e-07;24!UBERON:0000353;8.45e-07;15!UBERON:0006555;8.76e-07;15!UBERON:0004819;8.76e-07;15!UBERON:0001285;8.76e-07;15!UBERON:0007684;8.76e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.61e-11,192;UBERON:0004111,3.98e-11,240;UBERON:0000119,1.66e-09,309;UBERON:0000483,2.90e-09,306;UBERON:0010371,1.44e-07,104;UBERON:0003075,2.00e-07,82;UBERON:0007284,2.00e-07,82;UBERON:0002113,3.26e-07,26;UBERON:0003918,3.26e-07,26;UBERON:0011143,3.26e-07,26;UBERON:0005095,3.26e-07,26;UBERON:0007687,3.26e-07,26;UBERON:0006555,6.70e-07,16;UBERON:0004819,6.70e-07,16;UBERON:0003914,7.56e-07,117;UBERON:0000353,8.12e-07,15;UBERON:0004211,9.12e-07,15;UBERON:0009773,9.12e-07,15;UBERON:0001231,9.12e-07,15;UBERON:0001285,9.12e-07,15;UBERON:0007684,9.12e-07,15;UBERON:0004208,9.12e-07,15|phase1_expression=0.908391896352783,1.92690471501885,0.704772020479856,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,3.68600904752263,4.88460817580699,0.873765488520689,1.84636884759917,0.618831764800233,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,1.96993692922861,2.04000691244253,4.07491137921514,1.14494394852423,1.77936752594749,1.75759695432724,0.382067028739756,0.656804715599566,0.787107813136792,0,0,0.154816123316076,0.919421224478927,1.8072355126695,1.10926203050036,0,0,1.46800219667424,0,0.200544447470142,0,0.223915474239924,0,1.03030227053675,0.145398238779565,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,1.14005097496499,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.05353633910031,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0,0,0,0.390178042679635,0.164437904603676,0.829050053357545,0.289803085735052,0,0.535081656179426,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.66221330396589,0,1.00267582127178,1.15877215168659,2.3858578411533,3.89307896242109,1.22895262313288,0.886917589850256,1.05401742831751,1.11332214173056,1.09288586487763,0,0,0.870648686496336,0.930705723632056,0.715471872916026,0.571994910780128,1.11437250398869,1.39133685156694,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0.825354125820202,0.835979866147242,4.39308490587859,1.77883131343355,0.66944122552934,1.61131726843659,3.80136052859256,5.12530320851156,0,2.43042584364528,1.7859945656816,1.57170560838319,1.80178368773316,3.06633274931766,1.89853131913626,2.38162267109529,0,0,2.61656431285521,0.496971951695318,1.2663051166458,0.132409180813219,0.286836620748814,1.41867352879343,2.80338800071154,0,2.22000793575444,0,0.67355336034844,0.326923806226917,0.605429710579726,0,1.64025002283658,0.312160076830321,1.1409436430889,0.448346041655403,0.587172493218824,0.485618833104395,0.98315564691574,0.408308342509787,0.737005903870608,0.413303124703062,0,0.989067717114227,0.910161361938026,2.87447256726495,1.0100166837244,1.00094815897571,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,0.907457465280168,0.717558542755448,0.640672166455702,1.27159140695737,0.300091096084402,0.92747276314595,0.257640540045629,1.48893485065272,0.168776332241266,0.68205903612839,0.252433774244115,1.10459878370759,0.323292113637624,1.42003837006646,1.10827308050404,1.69560592310488,2.12586938479627,1.63647672354501,0.860413786167011,1.09776335516636,2.12047629314376,2.67246068599892,0.932949495138334,1.51392510525377,1.09493207722749,0,2.57296375277154,0,0,0.721879481669586,2.9576700009961,2.36018566109342,1.20505514941741,3.639701100169,1.30727666455444,2.60997681022206,2.56179485504312,1.56977172100277,2.69323009862473,3.69077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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14002 | |||
|TSSclassifier=S | |||
|UniProt=O14519 | |||
|association_with_transcript=27bp_to_ENST00000261692,NM_004642,uc001ueq.2_5end | |||
|description=CAGE_peak_8_at_CDK2AP1_5end | |||
|id=chr12:123756648..123756659,- | |||
|ontology_enrichment_celltype=CL:0000066!4.85e-13!254;CL:0002321!4.90e-09!248;CL:0000220!1.06e-08!246;CL:0000115!2.91e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000449;8.76e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-08,253;CL:0000115,3.59e-08,36;CL:1000449,9.12e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!7.97e-14!286;UBERON:0004111!8.55e-14!241;UBERON:0000025!1.72e-11!194;UBERON:0000119!6.99e-11!312;UBERON:0000468!1.33e-10!659;UBERON:0000483!1.65e-10!309;UBERON:0000475!9.97e-10!365;UBERON:0000467!1.69e-09!625;UBERON:0000064!2.67e-09!219;UBERON:0000480!2.98e-09!626;UBERON:0000481!2.78e-08!347;UBERON:0000922!2.34e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.48e-07;30!UBERON:0001008;1.48e-07;30!UBERON:0002113;2.24e-07;24!UBERON:0011143;2.24e-07;24!UBERON:0000353;8.45e-07;15!UBERON:0006555;8.76e-07;15!UBERON:0004819;8.76e-07;15!UBERON:0001285;8.76e-07;15!UBERON:0007684;8.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.61e-11,192;UBERON:0004111,3.98e-11,240;UBERON:0000119,1.66e-09,309;UBERON:0000483,2.90e-09,306;UBERON:0010371,1.44e-07,104;UBERON:0003075,2.00e-07,82;UBERON:0007284,2.00e-07,82;UBERON:0002113,3.26e-07,26;UBERON:0003918,3.26e-07,26;UBERON:0011143,3.26e-07,26;UBERON:0005095,3.26e-07,26;UBERON:0007687,3.26e-07,26;UBERON:0006555,6.70e-07,16;UBERON:0004819,6.70e-07,16;UBERON:0003914,7.56e-07,117;UBERON:0000353,8.12e-07,15;UBERON:0004211,9.12e-07,15;UBERON:0009773,9.12e-07,15;UBERON:0001231,9.12e-07,15;UBERON:0001285,9.12e-07,15;UBERON:0007684,9.12e-07,15;UBERON:0004208,9.12e-07,15 | |||
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| |||
|short_description=p8@CDK2AP1 | |||
}} |
Revision as of 21:31, 10 September 2013
Short description: | p8@CDK2AP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CDK2AP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000261692, NM_004642, uc001ueq.2_5end |
EntrezGene: | CDK2AP1 |
HGNC: | 14002 |
UniProt: | O14519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.23e-08 | 253 |
endothelial cell | 3.59e-08 | 36 |
epithelial cell of nephron | 9.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
tube | 3.61e-11 | 192 |
anatomical conduit | 3.98e-11 | 240 |
cell layer | 1.66e-09 | 309 |
epithelium | 2.90e-09 | 306 |
ecto-epithelium | 1.44e-07 | 104 |
neural plate | 2.00e-07 | 82 |
presumptive neural plate | 2.00e-07 | 82 |
kidney | 3.26e-07 | 26 |
kidney mesenchyme | 3.26e-07 | 26 |
upper urinary tract | 3.26e-07 | 26 |
kidney rudiment | 3.26e-07 | 26 |
kidney field | 3.26e-07 | 26 |
excretory tube | 6.70e-07 | 16 |
kidney epithelium | 6.70e-07 | 16 |
epithelial tube | 7.56e-07 | 117 |
parenchyma | 8.12e-07 | 15 |
nephron epithelium | 9.12e-07 | 15 |
renal tubule | 9.12e-07 | 15 |
nephron tubule | 9.12e-07 | 15 |
nephron | 9.12e-07 | 15 |
uriniferous tubule | 9.12e-07 | 15 |
nephrogenic mesenchyme | 9.12e-07 | 15 |
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