FFCP PHASE1:Hg19::chr12:32260259..32260268,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=636|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1049|TSSclassifier=S|UniProt=F8W056|association_with_transcript=29bp_to_ENST00000551086_5end|description=CAGE_peak_6_at_BICD1_5end|id=chr12:32260259..32260268,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002605;8.95e-10;3!CL:0000039;1.11e-09;7!CL:0000586;1.11e-09;7!CL:0000785;5.97e-08;1!CL:0000819;5.97e-08;1!CL:0002379;5.97e-08;1|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-09,7;CL:0000586,1.13e-09,7;CL:0002605,1.82e-09,3;CL:0000133,3.59e-09,59;CL:0000819,4.11e-08,1;CL:0002379,8.12e-08,1;CL:0000221,2.86e-07,72|ontology_enrichment_development_v019=UBERON:0009117;6.67e-07;10!UBERON:0005564;6.67e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;5.97e-08;1!DOID:0060073;5.97e-08;1!DOID:8675;5.97e-08;1!DOID:3565;5.97e-08;1|ontology_enrichment_disease_v019_2=DOID:0060073,4.11e-08,1;DOID:8675,4.11e-08,1;DOID:3620,8.12e-08,1;DOID:3565,8.12e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000922;1.17e-10;49!UBERON:0002114;4.78e-10;2!UBERON:0000473;1.59e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0002114,4.79e-10,2;UBERON:0000473,1.61e-08,8|phase1_expression=0.726713517082227,0.428201047781966,0,0,0,0,2.53299878168311,0,0,0.491467873003018,0,0,0.263766978228454,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0.286235987131057,1.09499540058307,1.00434111675842,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0.739508020333575,0.232401601740905,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0.616804496998528,0,0,0,0,0,0.294605907474837,0.664601683750863,0.541607727530031,0,0.130059347559878,0.164437904603676,0.552700035571697,0,0,0,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.351339142772504,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0.757301322732344,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,1.21973706129595,0.265059536642971,0.580969714347592,1.24393266018445,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844,0.674338760312407,0.482022059766964,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.579652024875384,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0.773288812777695,0,1.91381625495949,0,0,0,0,0,0,0,1.07057393278297,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0.771048469013278,0.177561725313127,0,0.519254429183621,0.116210378459959,0.241718899183244,0,0.276242966807689,0.114814448164607,0.910455840033585,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0.366277859273374,0,0,0.650060246036521,0,0,0.308097234229289,0.15350367472613,0.551346289938122,0,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0.399158742865633,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0.16480387422676,0.422250816255987,0.19924798825107,0,0.503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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |||
|TSSclassifier=S | |||
|UniProt=F8W056 | |||
|association_with_transcript=29bp_to_ENST00000551086_5end | |||
|description=CAGE_peak_6_at_BICD1_5end | |||
|id=chr12:32260259..32260268,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;8.95e-10;3!CL:0000039;1.11e-09;7!CL:0000586;1.11e-09;7!CL:0000785;5.97e-08;1!CL:0000819;5.97e-08;1!CL:0002379;5.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.13e-09,7;CL:0000586,1.13e-09,7;CL:0002605,1.82e-09,3;CL:0000133,3.59e-09,59;CL:0000819,4.11e-08,1;CL:0002379,8.12e-08,1;CL:0000221,2.86e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.67e-07;10!UBERON:0005564;6.67e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;5.97e-08;1!DOID:0060073;5.97e-08;1!DOID:8675;5.97e-08;1!DOID:3565;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,4.11e-08,1;DOID:8675,4.11e-08,1;DOID:3620,8.12e-08,1;DOID:3565,8.12e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.17e-10;49!UBERON:0002114;4.78e-10;2!UBERON:0000473;1.59e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,4.79e-10,2;UBERON:0000473,1.61e-08,8 | |||
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| |||
|short_description=p6@BICD1 | |||
}} |
Revision as of 22:28, 10 September 2013
Short description: | p6@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_BICD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000551086_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | F8W056 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.13e-09 | 7 |
germ cell | 1.13e-09 | 7 |
astrocyte of the cerebral cortex | 1.82e-09 | 3 |
neurectodermal cell | 3.59e-09 | 59 |
B-1 B cell | 4.11e-08 | 1 |
meningothelial cell | 8.12e-08 | 1 |
ectodermal cell | 2.86e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 4.11e-08 | 1 |
lymphosarcoma | 4.11e-08 | 1 |
central nervous system cancer | 8.12e-08 | 1 |
meningioma | 8.12e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.