FFCP PHASE1:Hg19::chr12:32555079..32555083,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3278|description=CAGE_peak_at_chr12:32555079..32555083,+|id=chr12:32555079..32555083,+|ontology_enrichment_celltype=CL:0000066!1.75e-07!254|ontology_enrichment_celltype_v019=CL:0000039;4.41e-18;7!CL:0000586;4.41e-18;7|ontology_enrichment_celltype_v019_2=CL:0000039,4.96e-18,7;CL:0000586,4.96e-18,7|ontology_enrichment_development_v019=UBERON:0009117;8.57e-22;10!UBERON:0005564;8.57e-22;10!UBERON:0005754;8.17e-15;1!UBERON:0007297;4.68e-08;2|ontology_enrichment_disease=DOID:305!6.67e-09!106;DOID:0050687!6.26e-07!143|ontology_enrichment_disease_v019=DOID:1799;1.97e-14;1!DOID:10165;1.97e-14;1!DOID:1798;1.97e-14;1|ontology_enrichment_disease_v019_2=DOID:1799,3.15e-14,1;DOID:10165,3.15e-14,1;DOID:1798,3.15e-14,1|ontology_enrichment_uberon=UBERON:0007023!3.76e-16!115;UBERON:0003135!7.34e-09!11;UBERON:0003101!1.10e-08!22;UBERON:0000079!1.10e-08!22;UBERON:0000473!4.22e-08!8|ontology_enrichment_uberon_v019=UBERON:0000473;7.79e-42;8!UBERON:0003135;1.79e-30;11!UBERON:0000991;5.34e-16;21!UBERON:0003101;2.84e-15;22!UBERON:0000079;2.84e-15;22!UBERON:0000998;8.17e-15;1!UBERON:0006868;8.17e-15;1!UBERON:0000160;3.68e-12;17!UBERON:0000059;1.61e-11;11!UBERON:0004921;5.91e-10;33!UBERON:0005409;1.43e-09;22!UBERON:0002323;6.01e-08;45!UBERON:0002553;3.56e-07;52!UBERON:0001155;6.60e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.63e-42,8;UBERON:0003135,2.08e-30,11;UBERON:0000991,5.78e-16,21;UBERON:0009196,5.78e-16,21;UBERON:0009117,5.78e-16,21;UBERON:0005564,5.78e-16,21;UBERON:0004176,3.07e-15,22;UBERON:0003101,3.07e-15,22;UBERON:0000079,3.07e-15,22;UBERON:0000998,6.22e-15,1;UBERON:0006868,6.22e-15,1;UBERON:0000160,3.32e-12,17;UBERON:0000059,1.47e-11,11;UBERON:0002553,3.82e-10,61;UBERON:0002323,3.83e-10,46;UBERON:0004458,1.67e-09,49;UBERON:0003886,1.36e-08,54;UBERON:0005409,1.60e-08,25;UBERON:0003133,5.95e-07,48;UBERON:0001155,6.79e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.357198913136319,1.12264686313085,0.675668882899933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0.232387885739037,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,1.67121139316383,0,0.307160702099232,0,0.422008249231538,0.111308705022906,0,0.211125408127993,0.597743964753209,0.828851746593443,0.251932747854276,0.102268682502155,0,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0.174919999992391,0.724999575434793,0.227586896570999,0.254253650292766,0,0,0,0.347249989866585,0,0.361789315876224,1.52581736317083,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.359030577639089,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0,0,2.38835424159016,2.4441205797345,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.853828638089378,0,0,0.489961987071888,0.261177619741208,0,0.171986032471617,0.0967563312890851,0,0,0.290967049465258,0.176512253383001,0,0.137041924646751,0,0,0.782205530939212,0.0801588202515337,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0.248505071130865,0.235694034616795,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3278 | |||
|description=CAGE_peak_at_chr12:32555079..32555083,+ | |||
|id=chr12:32555079..32555083,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.75e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.41e-18;7!CL:0000586;4.41e-18;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.96e-18,7;CL:0000586,4.96e-18,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.57e-22;10!UBERON:0005564;8.57e-22;10!UBERON:0005754;8.17e-15;1!UBERON:0007297;4.68e-08;2 | |||
|ontology_enrichment_disease=DOID:305!6.67e-09!106;DOID:0050687!6.26e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.97e-14;1!DOID:10165;1.97e-14;1!DOID:1798;1.97e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.15e-14,1;DOID:10165,3.15e-14,1;DOID:1798,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.76e-16!115;UBERON:0003135!7.34e-09!11;UBERON:0003101!1.10e-08!22;UBERON:0000079!1.10e-08!22;UBERON:0000473!4.22e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.79e-42;8!UBERON:0003135;1.79e-30;11!UBERON:0000991;5.34e-16;21!UBERON:0003101;2.84e-15;22!UBERON:0000079;2.84e-15;22!UBERON:0000998;8.17e-15;1!UBERON:0006868;8.17e-15;1!UBERON:0000160;3.68e-12;17!UBERON:0000059;1.61e-11;11!UBERON:0004921;5.91e-10;33!UBERON:0005409;1.43e-09;22!UBERON:0002323;6.01e-08;45!UBERON:0002553;3.56e-07;52!UBERON:0001155;6.60e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.63e-42,8;UBERON:0003135,2.08e-30,11;UBERON:0000991,5.78e-16,21;UBERON:0009196,5.78e-16,21;UBERON:0009117,5.78e-16,21;UBERON:0005564,5.78e-16,21;UBERON:0004176,3.07e-15,22;UBERON:0003101,3.07e-15,22;UBERON:0000079,3.07e-15,22;UBERON:0000998,6.22e-15,1;UBERON:0006868,6.22e-15,1;UBERON:0000160,3.32e-12,17;UBERON:0000059,1.47e-11,11;UBERON:0002553,3.82e-10,61;UBERON:0002323,3.83e-10,46;UBERON:0004458,1.67e-09,49;UBERON:0003886,1.36e-08,54;UBERON:0005409,1.60e-08,25;UBERON:0003133,5.95e-07,48;UBERON:0001155,6.79e-07,9 | |||
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| |||
|short_description=p@chr12:32555079..32555083,+ | |||
}} |
Revision as of 22:29, 10 September 2013
Short description: | p@chr12:32555079..32555083, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:32555079..32555083, + |
Coexpression cluster: | C3278_testicular_small_colon_amniotic_seminal_Endothelial_stomach |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.96e-18 | 7 |
germ cell | 4.96e-18 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.63e-42 | 8 |
male reproductive organ | 2.08e-30 | 11 |
gonad | 5.78e-16 | 21 |
indifferent external genitalia | 5.78e-16 | 21 |
indifferent gonad | 5.78e-16 | 21 |
gonad primordium | 5.78e-16 | 21 |
external genitalia | 3.07e-15 | 22 |
male organism | 3.07e-15 | 22 |
male reproductive system | 3.07e-15 | 22 |
seminal vesicle | 6.22e-15 | 1 |
seminal fluid secreting gland | 6.22e-15 | 1 |
intestine | 3.32e-12 | 17 |
large intestine | 1.47e-11 | 11 |
anatomical cavity | 3.82e-10 | 61 |
body cavity | 3.83e-10 | 46 |
body cavity or lining | 1.67e-09 | 49 |
body cavity precursor | 1.36e-08 | 54 |
gastrointestinal system | 1.60e-08 | 25 |
reproductive organ | 5.95e-07 | 48 |
colon | 6.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.15e-14 | 1 |
endocrine pancreas cancer | 3.15e-14 | 1 |
pancreatic endocrine carcinoma | 3.15e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.